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Peptide record

TPDB23153

Antibacterial Antifungal standard
59 amino acids
Basic Information
3D PDB MODEL
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TPDB23153
Antibacterial Antifungal
Anti-infective peptides
Peptipedia AFP-GFuse Antifungipept CAFPdb dbAMP
standard
No
A 59-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, AFP-GFuse, Antifungipept, and other sources, with an available 3D structural model.
Sequence
LSKYGGQCSLKHNTCTYLKGGRNVIVNCPWFWNKKRCKSDRHHCEYDEHHRRVDCQTPV
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C303H466N98O85S6
AM
CK
7034.00
9.15
16
5
14
+6
2.92
-1.100
46.10
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
15845
2.25
21
Residue Composition
number
0
A
5
R
4
N
3
D
6
C
2
E
2
Q
4
G
5
H
1
I
3
L
6
K
0
M
1
F
2
P
3
S
3
T
2
W
3
Y
4
V
Amino Acid Distribution
A: 0 R: 5 N: 4 D: 3 C: 6 E: 2 Q: 2 G: 4 H: 5 I: 1 L: 3 K: 6 M: 0 F: 1 P: 2 S: 3 T: 3 W: 2 Y: 3 V: 4
Chemical Descriptors
59 reviewed residue count
C303H466N98O85S6 sequence-only estimate (linear, free termini)
7034.00 sequence-only estimate (linear, free termini)
9.15 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
2.92 sequence-only estimate (linear, free termini)
-1.100 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb Antifungipept