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Peptide record

TPDB23152

Antibacterial Antifungal standard
58 amino acids
Basic Information
3D PDB MODEL
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TPDB23152
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb dbAMP
standard
No
A 58-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, CAFPdb, and dbAMP, with an available 3D structural model.
Sequence
LSKYGGQCSLKHNTCTYLKGGRNVIVNCGSAANKRCKSDRHHCEYDEHHRRVDCQTPV
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C272H436N94O85S6
MFW
C
6575.39
8.85
15
5
13
+5
2.98
-1.000
50.34
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
4845
0.74
22
Residue Composition
number
2
A
5
R
4
N
3
D
6
C
2
E
2
Q
5
G
5
H
1
I
3
L
5
K
0
M
0
F
1
P
4
S
3
T
0
W
3
Y
4
V
Amino Acid Distribution
A: 2 R: 5 N: 4 D: 3 C: 6 E: 2 Q: 2 G: 5 H: 5 I: 1 L: 3 K: 5 M: 0 F: 0 P: 1 S: 4 T: 3 W: 0 Y: 3 V: 4
Chemical Descriptors
58 reviewed residue count
C272H436N94O85S6 sequence-only estimate (linear, free termini)
6575.39 sequence-only estimate (linear, free termini)
8.85 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
2.98 sequence-only estimate (linear, free termini)
-1.000 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb