TPDB

3D PDB MODEL

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TPDB ID TPDB23041

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP AVPpred-BWR dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 18-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, AVPpred-BWR, and other sources, with an available 3D structural model.

Sequence

LQEVDAGNFIPPPRWLLL

FASTA

>TPDB23041|Antibacterial;Antiviral|length=18
LQEVDAGNFIPPPRWLLL

Formula C99H152N24O25

Absent Amino Acids CHKMSTY

Common Amino Acids L

Mass 2078.44

PI 4.07

Basic Residues 1

Acidic Residues 2

Hydrophobic Residues 9

Net Charge -1

Boman Index 0.79

Hydrophobicity 0.217

Aliphatic Index 130.00

Half Life

Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 5500

Absorbance 280nm 264.62

Polar Residues 2

number

1

A

1

R

1

N

1

D

0

C

1

E

1

Q

1

G

0

H

1

I

4

L

0

K

0

M

1

F

3

P

0

S

0

T

1

W

0

Y

1

V

Amino Acid Distribution

A: 1 R: 1 N: 1 D: 1 C: 0 E: 1 Q: 1 G: 1 H: 0 I: 1 L: 4 K: 0 M: 0 F: 1 P: 3 S: 0 T: 0 W: 1 Y: 0 V: 1

Length

18

Formula

C99H152N24O25

Mass

2078.44

PI

4.07

Net Charge

-1

Boman Index

0.79

Hydrophobicity

0.217

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0