TPDB

3D PDB MODEL

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TPDB ID TPDB23016

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 18-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

LPAFCQAIGWGDPITHWS

FASTA

>TPDB23016|Antibacterial;Antiviral|length=18
LPAFCQAIGWGDPITHWS

Formula C94H131N23O24S1

Absent Amino Acids RNEKMYV

Common Amino Acids AGIPW

Mass 1999.27

PI 4.94

Basic Residues 1

Acidic Residues 1

Hydrophobic Residues 8

Net Charge -1

Boman Index -2.63

Hydrophobicity 0.233

Aliphatic Index 76.11

Half Life

Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 11000

Absorbance 280nm 550.20

Polar Residues 4

number

2

A

0

R

0

N

1

D

1

C

0

E

1

Q

2

G

1

H

2

I

1

L

0

K

0

M

1

F

2

P

1

S

1

T

2

W

0

Y

0

V

Amino Acid Distribution

A: 2 R: 0 N: 0 D: 1 C: 1 E: 0 Q: 1 G: 2 H: 1 I: 2 L: 1 K: 0 M: 0 F: 1 P: 2 S: 1 T: 1 W: 2 Y: 0 V: 0

Length

18

Formula

C94H131N23O24S1

Mass

1999.27

PI

4.94

Net Charge

-1

Boman Index

-2.63

Hydrophobicity

0.233

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0