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Peptide record

TPDB22997

Antibacterial Antifungal standard
17 amino acids
Basic Information
3D PDB MODEL
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TPDB22997
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 17-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
LMGLFNRIIRKVVKLFN
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C97H165N27O20S1
ADCEQHPSTWY
L
2061.61
12.42
4
0
10
+4
0.72
0.712
148.82
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
0
0.00
2
Residue Composition
number
0
A
2
R
2
N
0
D
0
C
0
E
0
Q
1
G
0
H
2
I
3
L
2
K
1
M
2
F
0
P
0
S
0
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 0 R: 2 N: 2 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 2 L: 3 K: 2 M: 1 F: 2 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 2
Chemical Descriptors
17 reviewed residue count
C97H165N27O20S1 sequence-only estimate (linear, free termini)
2061.61 sequence-only estimate (linear, free termini)
12.42 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
0.72 sequence-only estimate (linear, free termini)
0.712 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb