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Peptide record

TPDB22630

Antibacterial Antifungal standard
12 amino acids
Basic Information
3D PDB MODEL
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TPDB22630
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb dbAMP
standard
No
A 12-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, CAFPdb, and dbAMP, with an available 3D structural model.
Sequence
LCCGKYGFCGSG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C50H75N13O15S3
ARNDEQHIMPTWV
G
1194.40
8.01
1
0
3
+1
-0.53
0.542
32.50
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
1615
1.35
5
Residue Composition
number
0
A
0
R
0
N
0
D
3
C
0
E
0
Q
4
G
0
H
0
I
1
L
1
K
0
M
1
F
0
P
1
S
0
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 3 E: 0 Q: 0 G: 4 H: 0 I: 0 L: 1 K: 1 M: 0 F: 1 P: 0 S: 1 T: 0 W: 0 Y: 1 V: 0
Chemical Descriptors
12 reviewed residue count
C50H75N13O15S3 sequence-only estimate (linear, free termini)
1194.40 sequence-only estimate (linear, free termini)
8.01 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
-0.53 sequence-only estimate (linear, free termini)
0.542 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb