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Peptide record

TPDB22372

Antibacterial Antifungal standard
47 amino acids
Basic Information
3D PDB MODEL
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TPDB22372
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 47-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
KTCENLADTYKGPCFTTGGCDDHCKNKEHLLSGRCRDDFRCWCTRNC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C221H343N71O72S8
QIMV
C
5403.07
7.51
10
7
8
+1
3.10
-0.977
27.02
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
7490
1.39
18
Residue Composition
number
1
A
4
R
3
N
5
D
8
C
2
E
0
Q
4
G
2
H
0
I
3
L
4
K
0
M
2
F
1
P
1
S
5
T
1
W
1
Y
0
V
Amino Acid Distribution
A: 1 R: 4 N: 3 D: 5 C: 8 E: 2 Q: 0 G: 4 H: 2 I: 0 L: 3 K: 4 M: 0 F: 2 P: 1 S: 1 T: 5 W: 1 Y: 1 V: 0
Chemical Descriptors
47 reviewed residue count
C221H343N71O72S8 sequence-only estimate (linear, free termini)
5403.07 sequence-only estimate (linear, free termini)
7.51 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
3.10 sequence-only estimate (linear, free termini)
-0.977 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb