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Peptide record

TPDB22238

Antibacterial standard
5 amino acids
Basic Information
3D PDB MODEL
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TPDB22238
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 5-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
KPLFG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C28H44N6O6
ARNDCEQHIMSTWYV
GLKFP
560.69
10.10
1
0
2
+1
-0.66
0.140
78.00
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
0
0.00
0
Residue Composition
number
0
A
0
R
0
N
0
D
0
C
0
E
0
Q
1
G
0
H
0
I
1
L
1
K
0
M
1
F
1
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 0 L: 1 K: 1 M: 0 F: 1 P: 1 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
5 reviewed residue count
C28H44N6O6 sequence-only estimate (linear, free termini)
560.69 sequence-only estimate (linear, free termini)
10.10 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
-0.66 sequence-only estimate (linear, free termini)
0.140 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA