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Peptide record

TPDB22170

Antibacterial standard
7 amino acids
Basic Information
3D PDB MODEL
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TPDB22170
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 7-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
KMHATNH
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C34H55N13O10S1
RDCEQGILFPSWYV
H
837.95
10.10
3
0
2
+1
2.85
-1.543
14.29
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
0
0.00
2
Residue Composition
number
1
A
0
R
1
N
0
D
0
C
0
E
0
Q
0
G
2
H
0
I
0
L
1
K
1
M
0
F
0
P
0
S
1
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 0 N: 1 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 2 I: 0 L: 0 K: 1 M: 1 F: 0 P: 0 S: 0 T: 1 W: 0 Y: 0 V: 0
Chemical Descriptors
7 reviewed residue count
C34H55N13O10S1 sequence-only estimate (linear, free termini)
837.95 sequence-only estimate (linear, free termini)
10.10 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
2.85 sequence-only estimate (linear, free termini)
-1.543 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA