Back to search

Peptide record

TPDB22025

Antibacterial Antifungal standard
49 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB22025
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 49-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
KLCERRSKTWSGPCLISGNCKRQINVEHATSGACHRQGIGFACFCKKKC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C229H376N76O64S7
DMY
C
5442.40
9.68
12
2
12
+8
2.10
-0.492
51.84
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
5875
1.08
17
Residue Composition
number
3
A
4
R
2
N
0
D
7
C
2
E
2
Q
5
G
2
H
3
I
2
L
6
K
0
M
2
F
1
P
4
S
2
T
1
W
0
Y
1
V
Amino Acid Distribution
A: 3 R: 4 N: 2 D: 0 C: 7 E: 2 Q: 2 G: 5 H: 2 I: 3 L: 2 K: 6 M: 0 F: 2 P: 1 S: 4 T: 2 W: 1 Y: 0 V: 1
Chemical Descriptors
49 reviewed residue count
C229H376N76O64S7 sequence-only estimate (linear, free termini)
5442.40 sequence-only estimate (linear, free termini)
9.68 sequence-only estimate (linear, free termini)
+8 sequence-only estimate (linear, free termini)
2.10 sequence-only estimate (linear, free termini)
-0.492 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb