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Peptide record

TPDB21956

Antibacterial standard
10 amino acids
Basic Information
3D PDB MODEL
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TPDB21956
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 10-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
KKLRVRLSAK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C53H103N19O12
NDCEQGHIMFPTWY
K
1198.52
12.43
5
0
4
+5
3.42
-0.790
117.00
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
0
0.00
1
Residue Composition
number
1
A
2
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
2
L
3
K
0
M
0
F
0
P
1
S
0
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 1 R: 2 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 2 K: 3 M: 0 F: 0 P: 0 S: 1 T: 0 W: 0 Y: 0 V: 1
Chemical Descriptors
10 reviewed residue count
C53H103N19O12 sequence-only estimate (linear, free termini)
1198.52 sequence-only estimate (linear, free termini)
12.43 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
3.42 sequence-only estimate (linear, free termini)
-0.790 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA