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Peptide record

TPDB21735

Antibacterial standard
8 amino acids
Basic Information
3D PDB MODEL
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TPDB21735
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 8-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
KCDWWCRY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C53H70N14O12S2
ANEQGHILMFPSTV
CW
1159.35
8.28
2
1
3
+1
2.76
-1.250
0.00
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
12615
10.88
3
Residue Composition
number
0
A
1
R
0
N
1
D
2
C
0
E
0
Q
0
G
0
H
0
I
0
L
1
K
0
M
0
F
0
P
0
S
0
T
2
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 1 C: 2 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 1 M: 0 F: 0 P: 0 S: 0 T: 0 W: 2 Y: 1 V: 0
Chemical Descriptors
8 reviewed residue count
C53H70N14O12S2 sequence-only estimate (linear, free termini)
1159.35 sequence-only estimate (linear, free termini)
8.28 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
2.76 sequence-only estimate (linear, free termini)
-1.250 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA