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Peptide record

TPDB21693

Antibacterial standard
12 amino acids
Basic Information
3D PDB MODEL
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TPDB21693
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 12-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
KAIHRLIRRRRR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C69H131N33O13
NDCEQGMFPSTWYV
R
1631.01
13.10
8
0
4
+7
6.93
-1.625
105.83
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
0
0.00
0
Residue Composition
number
1
A
6
R
0
N
0
D
0
C
0
E
0
Q
0
G
1
H
2
I
1
L
1
K
0
M
0
F
0
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 6 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 1 I: 2 L: 1 K: 1 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
12 reviewed residue count
C69H131N33O13 sequence-only estimate (linear, free termini)
1631.01 sequence-only estimate (linear, free termini)
13.10 sequence-only estimate (linear, free termini)
+7 sequence-only estimate (linear, free termini)
6.93 sequence-only estimate (linear, free termini)
-1.625 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA