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Peptide record

TPDB21657

Antibacterial standard
12 amino acids
Basic Information
3D PDB MODEL
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TPDB21657
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 12-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
IWSAIWSGIKGL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C65H99N15O15
RNDCEQHMFPTYV
I
1330.59
10.10
1
0
7
+1
-1.31
0.917
138.33
Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour
11000
8.27
2
Residue Composition
number
1
A
0
R
0
N
0
D
0
C
0
E
0
Q
2
G
0
H
3
I
1
L
1
K
0
M
0
F
0
P
2
S
0
T
2
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 2 H: 0 I: 3 L: 1 K: 1 M: 0 F: 0 P: 0 S: 2 T: 0 W: 2 Y: 0 V: 0
Chemical Descriptors
12 reviewed residue count
C65H99N15O15 sequence-only estimate (linear, free termini)
1330.59 sequence-only estimate (linear, free termini)
10.10 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
-1.31 sequence-only estimate (linear, free termini)
0.917 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA