TPDB

3D PDB MODEL

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TPDB ID TPDB21652

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP AVPpred-BWR dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 35-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, AVPpred-BWR, and other sources, with an available 3D structural model.

Sequence

IWNHGNITLGEWYNQTKDLQQKFYEIIMDIEQNNV

FASTA

>TPDB21652|Antibacterial;Antiviral|length=35
IWNHGNITLGEWYNQTKDLQQKFYEIIMDIEQNNV

Formula C194H288N50O59S1

Absent Amino Acids ARCPS

Common Amino Acids NI

Mass 4296.78

PI 4.28

Basic Residues 3

Acidic Residues 5

Hydrophobic Residues 14

Net Charge -3

Boman Index 6.64

Hydrophobicity -0.789

Aliphatic Index 86.29

Half Life

Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 13980

Absorbance 280nm 325.36

Polar Residues 13

number

0

A

0

R

5

N

2

D

0

C

3

E

4

Q

2

G

1

H

5

I

2

L

2

K

1

M

1

F

0

P

0

S

2

T

2

W

2

Y

1

V

Amino Acid Distribution

A: 0 R: 0 N: 5 D: 2 C: 0 E: 3 Q: 4 G: 2 H: 1 I: 5 L: 2 K: 2 M: 1 F: 1 P: 0 S: 0 T: 2 W: 2 Y: 2 V: 1

Length

35

Formula

C194H288N50O59S1

Mass

4296.78

PI

4.28

Net Charge

-3

Boman Index

6.64

Hydrophobicity

-0.789

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0