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Peptide record

TPDB21641

Antibacterial standard
9 amino acids
Basic Information
3D PDB MODEL
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TPDB21641
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 9-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
IVLVRRWPK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C56H95N17O10
ANDCEQGHMFSTY
RV
1166.48
12.41
3
0
5
+3
1.68
0.144
151.11
Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour
5500
4.72
0
Residue Composition
number
0
A
2
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
1
I
1
L
1
K
0
M
0
F
1
P
0
S
0
T
1
W
0
Y
2
V
Amino Acid Distribution
A: 0 R: 2 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 1 L: 1 K: 1 M: 0 F: 0 P: 1 S: 0 T: 0 W: 1 Y: 0 V: 2
Chemical Descriptors
9 reviewed residue count
C56H95N17O10 sequence-only estimate (linear, free termini)
1166.48 sequence-only estimate (linear, free termini)
12.41 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
1.68 sequence-only estimate (linear, free termini)
0.144 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA