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Peptide record

TPDB21587

Antibacterial standard
13 amino acids
Basic Information
3D PDB MODEL
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TPDB21587
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 13-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
IRHYGYRRWWDQT
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C85H117N27O20
ANCELKMFPSV
R
1837.03
10.24
4
1
5
+2
4.31
-1.900
30.00
Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour
13980
7.61
4
Residue Composition
number
0
A
3
R
0
N
1
D
0
C
0
E
1
Q
1
G
1
H
1
I
0
L
0
K
0
M
0
F
0
P
0
S
1
T
2
W
2
Y
0
V
Amino Acid Distribution
A: 0 R: 3 N: 0 D: 1 C: 0 E: 0 Q: 1 G: 1 H: 1 I: 1 L: 0 K: 0 M: 0 F: 0 P: 0 S: 0 T: 1 W: 2 Y: 2 V: 0
Chemical Descriptors
13 reviewed residue count
C85H117N27O20 sequence-only estimate (linear, free termini)
1837.03 sequence-only estimate (linear, free termini)
10.24 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
4.31 sequence-only estimate (linear, free termini)
-1.900 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA