TPDB

3D PDB MODEL

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TPDB ID TPDB21585

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAMP DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 27-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

IQKEIDRLNEVAKNLNESLIDLQELGK

FASTA

>TPDB21585|Antibacterial;Antiviral|length=27
IQKEIDRLNEVAKNLNESLIDLQELGK

Formula C135H232N38O46

Absent Amino Acids CHMFPTWY

Common Amino Acids L

Mass 3123.55

PI 4.44

Basic Residues 4

Acidic Residues 6

Hydrophobic Residues 10

Net Charge -2

Boman Index 13.05

Hydrophobicity -0.644

Aliphatic Index 130.00

Half Life

Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 0

Absorbance 280nm 0.00

Polar Residues 6

number

1

A

1

R

3

N

2

D

0

C

4

E

2

Q

1

G

0

H

3

I

5

L

3

K

0

M

0

F

0

P

1

S

0

T

0

W

0

Y

1

V

Amino Acid Distribution

A: 1 R: 1 N: 3 D: 2 C: 0 E: 4 Q: 2 G: 1 H: 0 I: 3 L: 5 K: 3 M: 0 F: 0 P: 0 S: 1 T: 0 W: 0 Y: 0 V: 1

Length

27

Formula

C135H232N38O46

Mass

3123.55

PI

4.44

Net Charge

-2

Boman Index

13.05

Hydrophobicity

-0.644

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAMP DRAVP 2.0