TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB21327

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 12-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

IKWEYVLLLFLL

FASTA

>TPDB21327|Antibacterial;Antiviral|length=12
IKWEYVLLLFLL

Formula C81H124N14O16

Absent Amino Acids ARNDCQGHMPST

Common Amino Acids L

Mass 1549.96

PI 6.87

Basic Residues 1

Acidic Residues 1

Hydrophobic Residues 10

Net Charge -0

Boman Index -3.95

Hydrophobicity 1.742

Aliphatic Index 219.17

Half Life

Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 6990

Absorbance 280nm 450.98

Polar Residues 1

number

0

A

0

R

0

N

0

D

0

C

1

E

0

Q

0

G

0

H

1

I

5

L

1

K

0

M

1

F

0

P

0

S

0

T

1

W

1

Y

1

V

Amino Acid Distribution

A: 0 R: 0 N: 0 D: 0 C: 0 E: 1 Q: 0 G: 0 H: 0 I: 1 L: 5 K: 1 M: 0 F: 1 P: 0 S: 0 T: 0 W: 1 Y: 1 V: 1

Length

12

Formula

C81H124N14O16

Mass

1549.96

PI

6.87

Net Charge

-0

Boman Index

-3.95

Hydrophobicity

1.742

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0