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Peptide record

TPDB21266

Antibacterial standard
5 amino acids
Basic Information
3D PDB MODEL
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TPDB21266
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 5-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
IHGLV
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C25H43N7O6
ARNDCEQKMFPSTWY
GHILV
537.66
7.85
1
0
3
+0
-2.03
1.780
214.00
Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour
0
0.00
0
Residue Composition
number
0
A
0
R
0
N
0
D
0
C
0
E
0
Q
1
G
1
H
1
I
1
L
0
K
0
M
0
F
0
P
0
S
0
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 1 I: 1 L: 1 K: 0 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 1
Chemical Descriptors
5 reviewed residue count
C25H43N7O6 sequence-only estimate (linear, free termini)
537.66 sequence-only estimate (linear, free termini)
7.85 sequence-only estimate (linear, free termini)
+0 sequence-only estimate (linear, free termini)
-2.03 sequence-only estimate (linear, free termini)
1.780 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA