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Peptide record

TPDB21131

Antibacterial standard
10 amino acids
Basic Information
3D PDB MODEL
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TPDB21131
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 10-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
HQIYPVTQPL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C56H86N14O15
ARNDCEGKMFSW
QP
1195.38
7.77
1
0
4
+0
0.46
-0.290
107.00
Mammalian: 3.5 hour Yeast: 10 min E.coli: >10 hour
1490
1.25
4
Residue Composition
number
0
A
0
R
0
N
0
D
0
C
0
E
2
Q
0
G
1
H
1
I
1
L
0
K
0
M
0
F
2
P
0
S
1
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 2 G: 0 H: 1 I: 1 L: 1 K: 0 M: 0 F: 0 P: 2 S: 0 T: 1 W: 0 Y: 1 V: 1
Chemical Descriptors
10 reviewed residue count
C56H86N14O15 sequence-only estimate (linear, free termini)
1195.38 sequence-only estimate (linear, free termini)
7.77 sequence-only estimate (linear, free termini)
+0 sequence-only estimate (linear, free termini)
0.46 sequence-only estimate (linear, free termini)
-0.290 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA