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Peptide record

TPDB21010

Antibacterial Antifungal standard
27 amino acids
Basic Information
3D PDB MODEL
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TPDB21010
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 27-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
HGLASTLTRWAHYNALIRAFGCGKKKK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C137H219N43O33S1
DEQMPV
AK
3028.57
11.02
8
0
11
+6
1.49
-0.433
72.59
Mammalian: 3.5 hour Yeast: 10 min E.coli: >10 hour
6990
2.31
6
Residue Composition
number
4
A
2
R
1
N
0
D
1
C
0
E
0
Q
3
G
2
H
1
I
3
L
4
K
0
M
1
F
0
P
1
S
2
T
1
W
1
Y
0
V
Amino Acid Distribution
A: 4 R: 2 N: 1 D: 0 C: 1 E: 0 Q: 0 G: 3 H: 2 I: 1 L: 3 K: 4 M: 0 F: 1 P: 0 S: 1 T: 2 W: 1 Y: 1 V: 0
Chemical Descriptors
27 reviewed residue count
C137H219N43O33S1 sequence-only estimate (linear, free termini)
3028.57 sequence-only estimate (linear, free termini)
11.02 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
1.49 sequence-only estimate (linear, free termini)
-0.433 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb