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Peptide record

TPDB20824

Antibacterial Antifungal standard
100 amino acids
Basic Information
3D PDB MODEL
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TPDB20824
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb dbAMP
standard
No
A 100-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, CAFPdb, and dbAMP, with an available 3D structural model.
Sequence
GWLDIVKAIVVPAARETIKTQEITLLDHYCTLSRSPYIKSLELHYRAEVTCPGWTIIRGRGSNHRNPTNSGKDALKDFMTQAVAAGLVTKEEAAPWLNHR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C498H794N144O144S3
A
11198.84
9.34
17
10
40
+3
1.69
-0.324
89.80
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
21095
1.88
25
Residue Composition
number
10
A
7
R
4
N
4
D
2
C
6
E
2
Q
6
G
4
H
7
I
9
L
6
K
1
M
1
F
5
P
5
S
9
T
3
W
3
Y
6
V
Amino Acid Distribution
A: 10 R: 7 N: 4 D: 4 C: 2 E: 6 Q: 2 G: 6 H: 4 I: 7 L: 9 K: 6 M: 1 F: 1 P: 5 S: 5 T: 9 W: 3 Y: 3 V: 6
Chemical Descriptors
100 reviewed residue count
C498H794N144O144S3 sequence-only estimate (linear, free termini)
11198.84 sequence-only estimate (linear, free termini)
9.34 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
1.69 sequence-only estimate (linear, free termini)
-0.324 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb