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Peptide record

TPDB20820

Antibacterial Antifungal standard
24 amino acids
Basic Information
3D PDB MODEL
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TPDB20820
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 24-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
GWKSVFRKAKKVGKTVGGLALDHY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C123H197N35O30
NCEQIMP
K
2646.13
10.76
7
1
10
+5
1.15
-0.392
77.08
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
6990
2.64
3
Residue Composition
number
2
A
1
R
0
N
1
D
0
C
0
E
0
Q
4
G
1
H
0
I
2
L
5
K
0
M
1
F
0
P
1
S
1
T
1
W
1
Y
3
V
Amino Acid Distribution
A: 2 R: 1 N: 0 D: 1 C: 0 E: 0 Q: 0 G: 4 H: 1 I: 0 L: 2 K: 5 M: 0 F: 1 P: 0 S: 1 T: 1 W: 1 Y: 1 V: 3
Chemical Descriptors
24 reviewed residue count
C123H197N35O30 sequence-only estimate (linear, free termini)
2646.13 sequence-only estimate (linear, free termini)
10.76 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
1.15 sequence-only estimate (linear, free termini)
-0.392 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb