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Peptide record

TPDB20754

Antibacterial standard
11 amino acids
Basic Information
3D PDB MODEL
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TPDB20754
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 11-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
GVCEGPGNTMC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C40H66N12O16S3
ARDQHILKFSWY
G
1067.21
3.29
0
1
2
-1
0.39
0.055
26.36
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
125
0.12
4
Residue Composition
number
0
A
0
R
1
N
0
D
2
C
1
E
0
Q
3
G
0
H
0
I
0
L
0
K
1
M
0
F
1
P
0
S
1
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 0 N: 1 D: 0 C: 2 E: 1 Q: 0 G: 3 H: 0 I: 0 L: 0 K: 0 M: 1 F: 0 P: 1 S: 0 T: 1 W: 0 Y: 0 V: 1
Chemical Descriptors
11 reviewed residue count
C40H66N12O16S3 sequence-only estimate (linear, free termini)
1067.21 sequence-only estimate (linear, free termini)
3.29 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
0.39 sequence-only estimate (linear, free termini)
0.055 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA