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Peptide record

TPDB20747

Antibacterial Antifungal standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB20747
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 18-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
GVIKSVLKGVAKTVALGM
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C80H147N21O21S1
RNDCEQHFPWY
V
1771.24
10.84
3
0
10
+3
-0.95
1.111
140.56
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
2
Residue Composition
number
2
A
0
R
0
N
0
D
0
C
0
E
0
Q
3
G
0
H
1
I
2
L
3
K
1
M
0
F
0
P
1
S
1
T
0
W
0
Y
4
V
Amino Acid Distribution
A: 2 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 3 H: 0 I: 1 L: 2 K: 3 M: 1 F: 0 P: 0 S: 1 T: 1 W: 0 Y: 0 V: 4
Chemical Descriptors
18 reviewed residue count
C80H147N21O21S1 sequence-only estimate (linear, free termini)
1771.24 sequence-only estimate (linear, free termini)
10.84 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
-0.95 sequence-only estimate (linear, free termini)
1.111 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb