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Peptide record

TPDB20707

Antibacterial standard
13 amino acids
Basic Information
3D PDB MODEL
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TPDB20707
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 13-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
GTNLYMLPKWDIP
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C73H110N16O19S1
ARCEQHFSV
LP
1547.83
6.68
1
1
6
-0
0.25
-0.262
90.00
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
6990
4.52
3
Residue Composition
number
0
A
0
R
1
N
1
D
0
C
0
E
0
Q
1
G
0
H
1
I
2
L
1
K
1
M
0
F
2
P
0
S
1
T
1
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 1 D: 1 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 1 L: 2 K: 1 M: 1 F: 0 P: 2 S: 0 T: 1 W: 1 Y: 1 V: 0
Chemical Descriptors
13 reviewed residue count
C73H110N16O19S1 sequence-only estimate (linear, free termini)
1547.83 sequence-only estimate (linear, free termini)
6.68 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
0.25 sequence-only estimate (linear, free termini)
-0.262 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA