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Peptide record

TPDB20643

Antibacterial Antifungal standard
100 amino acids
Basic Information
3D PDB MODEL
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TPDB20643
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb dbAMP
standard
No
A 100-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, CAFPdb, and dbAMP, with an available 3D structural model.
Sequence
GSFDFSSLLSSVANTAIKRLFVEREIDLFDHYCVLSRSPHIYSWELKFEATVTCPGWTPEKGRVRGYSSPTSAEREATKDFVQKIVRRGLVTREEASEWL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C515H795N141O153S2
M
S
11473.95
7.17
16
14
38
+0
2.11
-0.373
76.00
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
21095
1.84
26
Residue Composition
number
6
A
9
R
1
N
4
D
2
C
10
E
1
Q
5
G
2
H
4
I
8
L
5
K
0
M
6
F
4
P
12
S
7
T
3
W
3
Y
8
V
Amino Acid Distribution
A: 6 R: 9 N: 1 D: 4 C: 2 E: 10 Q: 1 G: 5 H: 2 I: 4 L: 8 K: 5 M: 0 F: 6 P: 4 S: 12 T: 7 W: 3 Y: 3 V: 8
Chemical Descriptors
100 reviewed residue count
C515H795N141O153S2 sequence-only estimate (linear, free termini)
11473.95 sequence-only estimate (linear, free termini)
7.17 sequence-only estimate (linear, free termini)
+0 sequence-only estimate (linear, free termini)
2.11 sequence-only estimate (linear, free termini)
-0.373 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb