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Peptide record

TPDB20632

Antibacterial standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB20632
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 18-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
GRRRRSVQWCAPRRWQWR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C106H166N44O22S1
NDEHILKMFTY
R
2440.83
12.80
7
0
5
+7
5.77
-1.972
21.67
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
16500
6.76
4
Residue Composition
number
1
A
7
R
0
N
0
D
1
C
0
E
2
Q
1
G
0
H
0
I
0
L
0
K
0
M
0
F
1
P
1
S
0
T
3
W
0
Y
1
V
Amino Acid Distribution
A: 1 R: 7 N: 0 D: 0 C: 1 E: 0 Q: 2 G: 1 H: 0 I: 0 L: 0 K: 0 M: 0 F: 0 P: 1 S: 1 T: 0 W: 3 Y: 0 V: 1
Chemical Descriptors
18 reviewed residue count
C106H166N44O22S1 sequence-only estimate (linear, free termini)
2440.83 sequence-only estimate (linear, free termini)
12.80 sequence-only estimate (linear, free termini)
+7 sequence-only estimate (linear, free termini)
5.77 sequence-only estimate (linear, free termini)
-1.972 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA