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Peptide record

TPDB20561

Antibacterial standard
17 amino acids
Basic Information
3D PDB MODEL
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TPDB20561
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 17-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
GNVIINGDCRHCNVRGG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C70H118N28O23S2
AEQLKMFPSTWY
G
1784.00
8.30
3
1
4
+1
2.29
-0.318
80.00
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
125
0.07
5
Residue Composition
number
0
A
2
R
3
N
1
D
2
C
0
E
0
Q
4
G
1
H
2
I
0
L
0
K
0
M
0
F
0
P
0
S
0
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 0 R: 2 N: 3 D: 1 C: 2 E: 0 Q: 0 G: 4 H: 1 I: 2 L: 0 K: 0 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 2
Chemical Descriptors
17 reviewed residue count
C70H118N28O23S2 sequence-only estimate (linear, free termini)
1784.00 sequence-only estimate (linear, free termini)
8.30 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
2.29 sequence-only estimate (linear, free termini)
-0.318 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA