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Peptide record

TPDB20546

Antibacterial standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB20546
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 18-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
GNNRPVYISQPRPPHPRL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C93H148N32O24
ADCEKMFTW
P
2098.40
12.11
4
0
4
+3
3.16
-1.400
59.44
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
1490
0.71
5
Residue Composition
number
0
A
3
R
2
N
0
D
0
C
0
E
1
Q
1
G
1
H
1
I
1
L
0
K
0
M
0
F
5
P
1
S
0
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 0 R: 3 N: 2 D: 0 C: 0 E: 0 Q: 1 G: 1 H: 1 I: 1 L: 1 K: 0 M: 0 F: 0 P: 5 S: 1 T: 0 W: 0 Y: 1 V: 1
Chemical Descriptors
18 reviewed residue count
C93H148N32O24 sequence-only estimate (linear, free termini)
2098.40 sequence-only estimate (linear, free termini)
12.11 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
3.16 sequence-only estimate (linear, free termini)
-1.400 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA