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Peptide record

TPDB20439

Antibacterial standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB20439
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 15-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
GKVNVDEVGGEALGR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C62H106N20O23
CQHIMFPSTWY
G
1499.64
4.44
2
3
5
-1
1.79
-0.387
90.67
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
1
Residue Composition
number
1
A
1
R
1
N
1
D
0
C
2
E
0
Q
4
G
0
H
0
I
1
L
1
K
0
M
0
F
0
P
0
S
0
T
0
W
0
Y
3
V
Amino Acid Distribution
A: 1 R: 1 N: 1 D: 1 C: 0 E: 2 Q: 0 G: 4 H: 0 I: 0 L: 1 K: 1 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 3
Chemical Descriptors
15 reviewed residue count
C62H106N20O23 sequence-only estimate (linear, free termini)
1499.64 sequence-only estimate (linear, free termini)
4.44 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
1.79 sequence-only estimate (linear, free termini)
-0.387 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA