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Peptide record

TPDB20430

Antibacterial standard
16 amino acids
Basic Information
3D PDB MODEL
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TPDB20430
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 16-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
GLRKRLRKFINKIKIK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C93H171N31O18
ADCEQHMPSTWYV
K
2011.58
12.72
8
0
6
+8
3.16
-0.813
121.88
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
1
Residue Composition
number
0
A
3
R
1
N
0
D
0
C
0
E
0
Q
1
G
0
H
3
I
2
L
5
K
0
M
1
F
0
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 3 N: 1 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 3 L: 2 K: 5 M: 0 F: 1 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
16 reviewed residue count
C93H171N31O18 sequence-only estimate (linear, free termini)
2011.58 sequence-only estimate (linear, free termini)
12.72 sequence-only estimate (linear, free termini)
+8 sequence-only estimate (linear, free termini)
3.16 sequence-only estimate (linear, free termini)
-0.813 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA