Back to search

Peptide record

TPDB20427

Antibacterial standard
16 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB20427
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 16-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
GLRKRLRKFINKIKEI
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C92H166N30O20
ADCQHMPSTWYV
K
2012.52
12.16
7
1
6
+6
3.24
-0.788
121.88
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
1
Residue Composition
number
0
A
3
R
1
N
0
D
0
C
1
E
0
Q
1
G
0
H
3
I
2
L
4
K
0
M
1
F
0
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 3 N: 1 D: 0 C: 0 E: 1 Q: 0 G: 1 H: 0 I: 3 L: 2 K: 4 M: 0 F: 1 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
16 reviewed residue count
C92H166N30O20 sequence-only estimate (linear, free termini)
2012.52 sequence-only estimate (linear, free termini)
12.16 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
3.24 sequence-only estimate (linear, free termini)
-0.788 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA