Back to search

Peptide record

TPDB20201

Antibacterial Antifungal standard
19 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB20201
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 19-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
GKLNLFLSRLEILKLFVGA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C102H171N25O24
DCQHMPTWY
L
2131.63
10.59
3
1
11
+2
-0.28
0.947
164.21
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
2
Residue Composition
number
1
A
1
R
1
N
0
D
0
C
1
E
0
Q
2
G
0
H
1
I
6
L
2
K
0
M
2
F
0
P
1
S
0
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 1 R: 1 N: 1 D: 0 C: 0 E: 1 Q: 0 G: 2 H: 0 I: 1 L: 6 K: 2 M: 0 F: 2 P: 0 S: 1 T: 0 W: 0 Y: 0 V: 1
Chemical Descriptors
19 reviewed residue count
C102H171N25O24 sequence-only estimate (linear, free termini)
2131.63 sequence-only estimate (linear, free termini)
10.59 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
-0.28 sequence-only estimate (linear, free termini)
0.947 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb