TPDB

3D PDB MODEL

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TPDB ID TPDB20144

Activity

Antibacterial Antiparasitic

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 30-aa modified multi-activity (Antibacterial and Antiparasitic) peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

GIPCGESCVWIPCISSAIGCSCXSXVCYRN

FASTA

>TPDB20144|Antibacterial;Antiparasitic|length=30
GIPCGESCVWIPCISSAIGCSCXSXVCYRN

Formula C121H191N33O38S6

Absent Amino Acids DQHLKMFT

Common Amino Acids C

Mass 2908.41

PI 5.90

Basic Residues 1

Acidic Residues 1

Hydrophobic Residues 9

Net Charge -0

Boman Index -0.67

Hydrophobicity 0.703

Aliphatic Index 74.67

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 7365

Absorbance 280nm 253.23

Polar Residues 13

number

1

A

1

R

1

N

0

D

6

C

1

E

0

Q

3

G

0

H

4

I

0

L

0

K

0

M

0

F

2

P

5

S

0

T

1

W

1

Y

2

V

Amino Acid Distribution

A: 1 R: 1 N: 1 D: 0 C: 6 E: 1 Q: 0 G: 3 H: 0 I: 4 L: 0 K: 0 M: 0 F: 0 P: 2 S: 5 T: 0 W: 1 Y: 1 V: 2

Length

30

Formula

C121H191N33O38S6

Mass

2908.41

PI

5.90

Net Charge

-0

Boman Index

-0.67

Hydrophobicity

0.703

Evidence 1 Activity

Source & Reference

Database Source NA