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Peptide record

TPDB19836

Antibacterial standard
17 amino acids
Basic Information
3D PDB MODEL
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TPDB19836
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 17-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
GGHYLGALLGPLMNLLQ
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C81H131N21O21S1
RDCEIKFSTWV
L
1767.12
7.77
1
0
9
+0
-1.20
0.694
143.53
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
1490
0.84
3
Residue Composition
number
1
A
0
R
1
N
0
D
0
C
0
E
1
Q
4
G
1
H
0
I
6
L
0
K
1
M
0
F
1
P
0
S
0
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 1 R: 0 N: 1 D: 0 C: 0 E: 0 Q: 1 G: 4 H: 1 I: 0 L: 6 K: 0 M: 1 F: 0 P: 1 S: 0 T: 0 W: 0 Y: 1 V: 0
Chemical Descriptors
17 reviewed residue count
C81H131N21O21S1 sequence-only estimate (linear, free termini)
1767.12 sequence-only estimate (linear, free termini)
7.77 sequence-only estimate (linear, free termini)
+0 sequence-only estimate (linear, free termini)
-1.20 sequence-only estimate (linear, free termini)
0.694 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA