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Peptide record

TPDB19831

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB19831
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
GGHGVRRFPWWWPFLRRGGC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C115H159N37O21S1
ANDEQIKMSTY
G
2427.82
12.40
5
0
7
+4
1.82
-0.650
34.00
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
16500
6.80
1
Residue Composition
number
0
A
4
R
0
N
0
D
1
C
0
E
0
Q
5
G
1
H
0
I
1
L
0
K
0
M
2
F
2
P
0
S
0
T
3
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 4 N: 0 D: 0 C: 1 E: 0 Q: 0 G: 5 H: 1 I: 0 L: 1 K: 0 M: 0 F: 2 P: 2 S: 0 T: 0 W: 3 Y: 0 V: 1
Chemical Descriptors
20 reviewed residue count
C115H159N37O21S1 sequence-only estimate (linear, free termini)
2427.82 sequence-only estimate (linear, free termini)
12.40 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
1.82 sequence-only estimate (linear, free termini)
-0.650 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA