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Peptide record

TPDB19829

Antibacterial standard
17 amino acids
Basic Information
3D PDB MODEL
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TPDB19829
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 17-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
GFIGWGNDIFGHYSGGF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C88H111N21O23
ARCEQLKMPTV
G
1830.98
4.94
1
1
7
-1
-0.19
0.106
45.88
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
6990
3.82
3
Residue Composition
number
0
A
0
R
1
N
1
D
0
C
0
E
0
Q
6
G
1
H
2
I
0
L
0
K
0
M
3
F
0
P
1
S
0
T
1
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 1 D: 1 C: 0 E: 0 Q: 0 G: 6 H: 1 I: 2 L: 0 K: 0 M: 0 F: 3 P: 0 S: 1 T: 0 W: 1 Y: 1 V: 0
Chemical Descriptors
17 reviewed residue count
C88H111N21O23 sequence-only estimate (linear, free termini)
1830.98 sequence-only estimate (linear, free termini)
4.94 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
-0.19 sequence-only estimate (linear, free termini)
0.106 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA