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Peptide record

TPDB19672

Antibacterial Antifungal standard
12 amino acids
Basic Information
3D PDB MODEL
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TPDB19672
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 12-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
GCHRMNKCVFSS
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C55H89N19O16S3
ADEQILPTWY
CS
1368.61
9.15
3
0
3
+2
2.14
-0.267
24.17
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
125
0.09
5
Residue Composition
number
0
A
1
R
1
N
0
D
2
C
0
E
0
Q
1
G
1
H
0
I
0
L
1
K
1
M
1
F
0
P
2
S
0
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 1 N: 1 D: 0 C: 2 E: 0 Q: 0 G: 1 H: 1 I: 0 L: 0 K: 1 M: 1 F: 1 P: 0 S: 2 T: 0 W: 0 Y: 0 V: 1
Chemical Descriptors
12 reviewed residue count
C55H89N19O16S3 sequence-only estimate (linear, free termini)
1368.61 sequence-only estimate (linear, free termini)
9.15 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
2.14 sequence-only estimate (linear, free termini)
-0.267 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb