TPDB

3D PDB MODEL

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TPDB ID TPDB19652

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP AVPpred-BWR dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 18-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, AVPpred-BWR, and other sources, with an available 3D structural model.

Sequence

GAIVSTALPQWRIYSYAG

FASTA

>TPDB19652|Antibacterial;Antiviral|length=18
GAIVSTALPQWRIYSYAG

Formula C91H137N23O25

Absent Amino Acids NDCEHKMF

Common Amino Acids A

Mass 1953.23

PI 9.63

Basic Residues 1

Acidic Residues 0

Hydrophobic Residues 10

Net Charge +1

Boman Index -3.09

Hydrophobicity 0.344

Aliphatic Index 97.78

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 8480

Absorbance 280nm 434.15

Polar Residues 6

number

3

A

1

R

0

N

0

D

0

C

0

E

1

Q

2

G

0

H

2

I

1

L

0

K

0

M

0

F

1

P

2

S

1

T

1

W

2

Y

1

V

Amino Acid Distribution

A: 3 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 1 G: 2 H: 0 I: 2 L: 1 K: 0 M: 0 F: 0 P: 1 S: 2 T: 1 W: 1 Y: 2 V: 1

Length

18

Formula

C91H137N23O25

Mass

1953.23

PI

9.63

Net Charge

+1

Boman Index

-3.09

Hydrophobicity

0.344

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0