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Peptide record

TPDB19561

Antibacterial standard
13 amino acids
Basic Information
3D PDB MODEL
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TPDB19561
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 13-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
FVQWFKKFLGRIE
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C85H124N20O17
ANDCHMPSTY
F
1698.04
10.59
3
1
7
+2
0.94
0.023
82.31
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
5500
3.24
1
Residue Composition
number
0
A
1
R
0
N
0
D
0
C
1
E
1
Q
1
G
0
H
1
I
1
L
2
K
0
M
3
F
0
P
0
S
0
T
1
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 0 E: 1 Q: 1 G: 1 H: 0 I: 1 L: 1 K: 2 M: 0 F: 3 P: 0 S: 0 T: 0 W: 1 Y: 0 V: 1
Chemical Descriptors
13 reviewed residue count
C85H124N20O17 sequence-only estimate (linear, free termini)
1698.04 sequence-only estimate (linear, free termini)
10.59 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
0.94 sequence-only estimate (linear, free termini)
0.023 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA