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Peptide record

TPDB19517

Antibacterial Antifungal standard
98 amino acids
Basic Information
3D PDB MODEL
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TPDB19517
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb dbAMP
standard
No
A 98-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, CAFPdb, and dbAMP, with an available 3D structural model.
Sequence
FSLKDLFVPVIKDQVSDLWRTGDIDLVGHSCTYNVKPDIQGFELYFIGSVTCPGWTTLRGESNTRSKSGVVNSAVKDFIQKALKAGLVTEEEAKPHLV
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C488H767N127O146S2
M
V
10813.34
6.09
13
12
38
-1
1.28
-0.105
92.35
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
14105
1.30
25
Residue Composition
number
4
A
3
R
3
N
7
D
2
C
5
E
3
Q
8
G
2
H
5
I
9
L
8
K
0
M
5
F
4
P
8
S
7
T
2
W
2
Y
11
V
Amino Acid Distribution
A: 4 R: 3 N: 3 D: 7 C: 2 E: 5 Q: 3 G: 8 H: 2 I: 5 L: 9 K: 8 M: 0 F: 5 P: 4 S: 8 T: 7 W: 2 Y: 2 V: 11
Chemical Descriptors
98 reviewed residue count
C488H767N127O146S2 sequence-only estimate (linear, free termini)
10813.34 sequence-only estimate (linear, free termini)
6.09 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
1.28 sequence-only estimate (linear, free termini)
-0.105 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb