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Peptide record

TPDB19406

Antibacterial standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB19406
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 18-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
FLSLLPSIVSGAVSLAKK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C86H148N20O23
RNDCEQHMTWY
LS
1830.24
10.60
2
0
10
+2
-0.86
1.194
151.67
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
0
0.00
4
Residue Composition
number
2
A
0
R
0
N
0
D
0
C
0
E
0
Q
1
G
0
H
1
I
4
L
2
K
0
M
1
F
1
P
4
S
0
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 2 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 1 L: 4 K: 2 M: 0 F: 1 P: 1 S: 4 T: 0 W: 0 Y: 0 V: 2
Chemical Descriptors
18 reviewed residue count
C86H148N20O23 sequence-only estimate (linear, free termini)
1830.24 sequence-only estimate (linear, free termini)
10.60 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
-0.86 sequence-only estimate (linear, free termini)
1.194 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA