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Peptide record

TPDB19364

Antibacterial Antifungal standard
88 amino acids
Basic Information
3D PDB MODEL
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TPDB19364
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb dbAMP
standard
No
A 88-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, CAFPdb, and dbAMP, with an available 3D structural model.
Sequence
FLLPPSTACCTQLYRKPLSDKLLRKVIQVELQEADGDCHLQAFVLHLAQRSICIHPQNPSLSQWFEHQERKLHGTLPKLNFGMLRKMG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C454H726N130O122S6
L
10149.92
9.12
16
7
33
+4
1.49
-0.291
94.20
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
7240
0.71
23
Residue Composition
number
4
A
5
R
2
N
3
D
4
C
4
E
8
Q
4
G
5
H
3
I
15
L
6
K
2
M
4
F
6
P
5
S
3
T
1
W
1
Y
3
V
Amino Acid Distribution
A: 4 R: 5 N: 2 D: 3 C: 4 E: 4 Q: 8 G: 4 H: 5 I: 3 L: 15 K: 6 M: 2 F: 4 P: 6 S: 5 T: 3 W: 1 Y: 1 V: 3
Chemical Descriptors
88 reviewed residue count
C454H726N130O122S6 sequence-only estimate (linear, free termini)
10149.92 sequence-only estimate (linear, free termini)
9.12 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
1.49 sequence-only estimate (linear, free termini)
-0.291 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb