Back to search

Peptide record

TPDB19226

Antibacterial Antifungal standard
94 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB19226
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb dbAMP
standard
No
A 94-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, CAFPdb, and dbAMP, with an available 3D structural model.
Sequence
FLKDLLFGEAKTALLEDGTTEILDHVCNFRVMPRLRSWELYFRGDVWCPGWTVIKGESLTRSRTRVVNKAVADFAQKALAQGLITQEDAQPLLE
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C482H761N131O138S3
L
10695.32
5.69
13
13
41
-1
1.56
-0.123
96.49
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
18115
1.69
19
Residue Composition
number
8
A
7
R
2
N
6
D
2
C
7
E
4
Q
6
G
1
H
3
I
13
L
5
K
1
M
5
F
3
P
3
S
7
T
3
W
1
Y
7
V
Amino Acid Distribution
A: 8 R: 7 N: 2 D: 6 C: 2 E: 7 Q: 4 G: 6 H: 1 I: 3 L: 13 K: 5 M: 1 F: 5 P: 3 S: 3 T: 7 W: 3 Y: 1 V: 7
Chemical Descriptors
94 reviewed residue count
C482H761N131O138S3 sequence-only estimate (linear, free termini)
10695.32 sequence-only estimate (linear, free termini)
5.69 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
1.56 sequence-only estimate (linear, free termini)
-0.123 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb