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Peptide record

TPDB19048

1A 4-[(3-Formyl-4- hydroxy)Phenylazo]benzene (FHPAB)) ACE inhibitor Bis(PhePhe) or 5a cyclo-Phe-Phe dipeptide diPhenylalanine dipeptide diPhenylalanine (FF) DiPhenylalanine diPhenylalanine (FF) DiPhenylalanine (H-Phe-Phe-OH) DiPhenylalanine bis-mannose conjugate DiPhenylalanine mono-mannose conjugate DiPhenylalanine peptide FF FF-MNT FF-nucleotide conjugate Fmoc-FF H-Phe-Phe-OH Inhibitor od Dipeptidyl Peptidase IV NDI-Phe-Phe or 1 NH2-L-Phe-L-Phe-COOH NH2-Phe-Phe-OH Peptide-porphyrin Phe-Phe Thiolated -DiPhenylalanine mono-mannose conjugate Zwitterionic dipeptide diPhenylalanine (l-Phe-l-Phe) ACE inhibitors Antibacterial Anticancer Antifungal Antihypertensive Antiparasitic Antiviral Bitter iDPPIV Selfassembly standard
2 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB19048
1A 4-[(3-Formyl-4- hydroxy)Phenylazo]benzene (FHPAB)) ACE inhibitor Bis(PhePhe) or 5a cyclo-Phe-Phe dipeptide diPhenylalanine dipeptide diPhenylalanine (FF) DiPhenylalanine diPhenylalanine (FF) DiPhenylalanine (H-Phe-Phe-OH) DiPhenylalanine bis-mannose conjugate DiPhenylalanine mono-mannose conjugate DiPhenylalanine peptide FF FF-MNT FF-nucleotide conjugate Fmoc-FF H-Phe-Phe-OH Inhibitor od Dipeptidyl Peptidase IV NDI-Phe-Phe or 1 NH2-L-Phe-L-Phe-COOH NH2-Phe-Phe-OH Peptide-porphyrin Phe-Phe Thiolated -DiPhenylalanine mono-mannose conjugate Zwitterionic dipeptide diPhenylalanine (l-Phe-l-Phe)
ACE inhibitors Antibacterial Anticancer Antifungal Antihypertensive Antiparasitic Antiviral Bitter iDPPIV Selfassembly
Anti-infective peptides Cardiometabolic peptides Cancer-related peptides Food sensory peptides Self-assembling and biomaterial peptides
Peptipedia SATPdb CAFPdb AHTPDB Tastepeptides-Meta iDPPIV SAPdb
standard
No
A 2-aa standard natural multi-activity (ACE inhibitors, Antibacterial, Anticancer, and other sources) peptide sequence curated from Peptipedia, SATPdb, CAFPdb, and other sources, with an available 3D structural model.
Sequence
FF
Physicochemical Analysis
C18H20N2O3
ARNDCEQGHILKMPSTWYV
F
312.37
6.02
0
0
2
-0
-2.26
2.800
0.00
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
0
0.00
0
Residue Composition
number
0
A
0
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
0
L
0
K
0
M
2
F
0
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 0 M: 0 F: 2 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
2
C18H20N2O3
312.37
6.02
-0
-2.26
2.800
312.3622
312.1469
Self-Assembly Information 64 records
Record 1 Selfassembly

Source

12714741
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube
temperature: 80 °C solvent: Aqueous dispersion concentration: >=100 mg/ml stock soln
Selfassembly; Nanostructure=Nanotube; Trigger=temperature: 80 °C; solvent: Aqueous dispersion; concentration: >=100 mg/ml stock soln
Transmission Electron Microscopy (TEM)
Selfassembly
Record 2 Selfassembly

Source

16430299
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube
temperature: Stable upto 90 °C solvent: Aqueous dispersion concentration: 2 mg/ml
Selfassembly; Nanostructure=Nanotube; Trigger=temperature: Stable upto 90 °C; solvent: Aqueous dispersion; concentration: 2 mg/ml
Scanning Electron Microscopy (SEM), Transmission Electron Microscopy (TEM), CD (Circular Dichroism spectroscopy)
Selfassembly
Record 3 Selfassembly

Source

16719470
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube
temperature: Stable upto 100 °C solvent: Aqueous dispersion concentration: 1mg/ml
Selfassembly; Nanostructure=Nanotube; Trigger=temperature: Stable upto 100 °C; solvent: Aqueous dispersion; concentration: 1mg/ml
AFM (Atomic Force Microscopy)
Selfassembly
Record 4 Selfassembly

Source

17328086
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube
pH: 7.2 temperature: Room temperature solvent: Aqueous dispersion concentration: 10 mg/ml
Selfassembly; Nanostructure=Nanotube; Trigger=pH: 7.2; temperature: Room temperature; solvent: Aqueous dispersion; concentration: 10 mg/ml
CD (Circular Dichroism spectroscopy)
Selfassembly
Record 5 Selfassembly

Source

18035858
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube
solvent: Aqueous dispersion concentration: 10 mg/ml
Selfassembly; Nanostructure=Nanotube; Trigger=solvent: Aqueous dispersion; concentration: 10 mg/ml
Scanning Electron Microscopy (SEM)
Selfassembly
Record 6 Selfassembly

Source

25621167
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanofiber
pH: 7 temperature: (-)20 °C solvent: Water concentration: 2mM
Selfassembly; Nanostructure=Nanofiber; Trigger=pH: 7; temperature: (-)20 °C; solvent: Water; concentration: 2mM
FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM)
Selfassembly
Record 7 Selfassembly

Source

22468743
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanovesicle, Nanotube Spherical vesicle ( in 7/10 MD runs) Nanotube (in 2/10 MD runs) Bialyer shape (in 1/10 MD runs)
temperature: 37 °C solvent: Water concentration: 85 mg/ml
Selfassembly; Nanostructure=Nanovesicle, Nanotube; Spherical vesicle ( in 7/10 MD runs); Nanotube (in 2/10 MD runs); Bialyer shape (in 1/10 MD runs); Trigger=temperature: 37 °C; solvent: Water; concentration: 85 mg/ml
Insilico tools i.e, Coarse - grained molecular dynamics (MD) simulations and GROMACS software
Selfassembly
Record 8 Selfassembly

Source

22468743
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanovesicle, Nanotube vesicle (in 3/10 MD runs) Nanotube ( in 3/10 MD runs) Flat bialyer with holes shape (in 4/10 MD runs)
temperature: 37 °C solvent: Water concentration: 120 mg/ml
Selfassembly; Nanostructure=Nanovesicle, Nanotube; vesicle (in 3/10 MD runs); Nanotube ( in 3/10 MD runs); Flat bialyer with holes shape (in 4/10 MD runs); Trigger=temperature: 37 °C; solvent: Water; concentration: 120 mg/ml
Insilico tools i.e, Coarse - grained molecular dynamics (MD) simulations and GROMACS software
Selfassembly
Record 9 Selfassembly

Source

19496552
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube
pH: 6 temperature: Room temperature solvent: 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP)/water concentration: 2mg/ml
Selfassembly; Nanostructure=Nanotube; Trigger=pH: 6; temperature: Room temperature; solvent: 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP)/water; concentration: 2mg/ml
AFM (Atomic Force Microscopy
Selfassembly
Record 10 Selfassembly

Source

20000323
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube Tubular Nanostructure
temperature: Room temperature solvent: Water concentration: 2mg/ml
Selfassembly; Nanostructure=Nanotube; Tubular Nanostructure; Trigger=temperature: Room temperature; solvent: Water; concentration: 2mg/ml
Scanning Electron Microscopy (SEM), AFM (Atomic Force Microscopy)
Selfassembly
Record 11 Selfassembly

Source

20000323
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanovesicle
temperature: 80 °C solvent: Acetone concentration: 2mg/ml
Selfassembly; Nanostructure=Nanovesicle; Trigger=temperature: 80 °C; solvent: Acetone; concentration: 2mg/ml
Scanning Electron Microscopy (SEM), AFM (Atomic Force Microscopy)
Selfassembly
Record 12 Selfassembly

Source

23706149
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanoparticle Randomly ordered , dense tubular Nanostructures
temperature: Room temperature solvent: Etahnol concentration: 2mg/ml
Selfassembly; Nanostructure=Nanoparticle; Randomly ordered , dense tubular Nanostructures; Trigger=temperature: Room temperature; solvent: Etahnol; concentration: 2mg/ml
Scanning Electron Microscopy (SEM)
Selfassembly
Record 13 Selfassembly

Source

23706149
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Organogel Organogel (Thick fibers)
temperature: Room temperature solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol)+Chloroform concentration: 8mM
Selfassembly; Nanostructure=Organogel; Organogel (Thick fibers); Trigger=temperature: Room temperature; solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol)+Chloroform; concentration: 8mM
Scanning Electron Microscopy (SEM)
Selfassembly
Record 14 Selfassembly

Source

23706149
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Organogel Organogel (Small fibres with varying length))
temperature: Room temperature solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol)+Chloroform concentration: 8mM
Selfassembly; Nanostructure=Organogel; Organogel (Small fibres with varying length)); Trigger=temperature: Room temperature; solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol)+Chloroform; concentration: 8mM
Scanning Electron Microscopy (SEM)
Selfassembly
Record 15 Selfassembly

Source

25229206
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Hydrogel
pH: 4.8 temperature: Room temperature solvent: Water concentration: 2% wt
Selfassembly; Nanostructure=Hydrogel; Trigger=pH: 4.8; temperature: Room temperature; solvent: Water; concentration: 2% wt
Transmission Electron Microscopy (TEM)
Selfassembly
Record 16 Selfassembly

Source

25229206
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Hydrogel Semitranslucent Hydrogel
pH: 7.4 temperature: Room temperature solvent: Water concentration: 2% wt
Selfassembly; Nanostructure=Hydrogel; Semitranslucent Hydrogel; Trigger=pH: 7.4; temperature: Room temperature; solvent: Water; concentration: 2% wt
Transmission Electron Microscopy (TEM)
Selfassembly
Record 17 Selfassembly

Source

24301009
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube
temperature: Room temperature solvent: HFP (1,1,1,3,3,3-hexafluoro-2-propanol) + water concentration: 2mg/ml
Selfassembly; Nanostructure=Nanotube; Trigger=temperature: Room temperature; solvent: HFP (1,1,1,3,3,3-hexafluoro-2-propanol) + water; concentration: 2mg/ml
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM) and AFM (Atomic Force Microscopy)
Selfassembly
Record 18 Selfassembly

Source

24422499
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Hydrogel Translucent gel
temperature: Room temperature solvent: Formamide solution concentration: 2.6 x 10 -4 M
Selfassembly; Nanostructure=Hydrogel; Translucent gel; Trigger=temperature: Room temperature; solvent: Formamide solution; concentration: 2.6 x 10 -4 M
Scanning Electron Microscopy (SEM)
Selfassembly
Record 19 Selfassembly

Source

19893524
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube Vertical Nanotube
temperature: 220 °C concentration: 1mg lyophilized powder
Selfassembly; Nanostructure=Nanotube; Vertical Nanotube; Trigger=temperature: 220 °C; concentration: 1mg lyophilized powder
Scanning Electron Microscopy (SEM)
Selfassembly
Record 20 Selfassembly

Source

19198495
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube
temperature: Room temperature solvent: Water concentration: 4mg/ml
Selfassembly; Nanostructure=Nanotube; Trigger=temperature: Room temperature; solvent: Water; concentration: 4mg/ml
FE - SEM (Field Emission Scanning Electron Microscopy)
Selfassembly
Record 21 Selfassembly

Source

19198495
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanoribbon
temperature: Room temperature solvent: Methanol concentration: 10mg/ml
Selfassembly; Nanostructure=Nanoribbon; Trigger=temperature: Room temperature; solvent: Methanol; concentration: 10mg/ml
FE - SEM (Field Emission Scanning Electron Microscopy)
Selfassembly
Record 22 Selfassembly

Source

19198495
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanoribbon, Nanowire Nanoribbon and Nanowires
temperature: Room temperature solvent: Dichloromethane concentration: 4mg/ml
Selfassembly; Nanostructure=Nanoribbon, Nanowire; Nanoribbon and Nanowires; Trigger=temperature: Room temperature; solvent: Dichloromethane; concentration: 4mg/ml
FE - SEM (Field Emission Scanning Electron Microscopy)
Selfassembly
Record 23 Selfassembly

Source

20356006
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanofiber Fibril
temperature: 50 °C for sonication solvent: Water + toluene concentration: 5mg/ml
Selfassembly; Nanostructure=Nanofiber; Fibril; Trigger=temperature: 50 °C for sonication; solvent: Water + toluene; concentration: 5mg/ml
FE - SEM (Field Emission Scanning Electron Microscopy)
Selfassembly
Record 24 Selfassembly

Source

20958029
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube
solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + water concentration: 2-5 mg/ml
Selfassembly; Nanostructure=Nanotube; Trigger=solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + water; concentration: 2-5 mg/ml
Scanning Electron Microscopy (SEM) and AFM (Atomic force Microscopy)
Selfassembly
Record 25 Selfassembly

Source

21132174
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube
pH: 5-6 solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + water concentration: 2mg/ml
Selfassembly; Nanostructure=Nanotube; Trigger=pH: 5-6; solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + water; concentration: 2mg/ml
Scanning Electron Microscopy (SEM)
Selfassembly
Record 26 Selfassembly

Source

21221462
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube
temperature: Room temperature solvent: HFP (1,1,1,3,3,3-hexafluoro-2-propanol) + water concentration: 1 mg/ml
Selfassembly; Nanostructure=Nanotube; Trigger=temperature: Room temperature; solvent: HFP (1,1,1,3,3,3-hexafluoro-2-propanol) + water; concentration: 1 mg/ml
Transmission Electron Microscopy (TEM) and DLS (Dynamic Light scattering)
Selfassembly
Record 27 Selfassembly

Source

21879773
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube Tubular structure
solvent: Ethanol concentration: 2 mg/ml
Selfassembly; Nanostructure=Nanotube; Tubular structure; Trigger=solvent: Ethanol; concentration: 2 mg/ml
Scanning Electron Microscopy (SEM)
Selfassembly
Record 28 Selfassembly

Source

21879773
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube, Nanoribbon Tubular and ribbon like morphology
solvent: Ethanol concentration: 2 mg/ml
Selfassembly; Nanostructure=Nanotube, Nanoribbon; Tubular and ribbon like morphology; Trigger=solvent: Ethanol; concentration: 2 mg/ml
Scanning Electron Microscopy (SEM)
Selfassembly
Record 29 Selfassembly

Source

21948432
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Hydrogel Hydogel (consists of fibers)
pH: 5 solvent: Water concentration: 2 %wt
Selfassembly; Nanostructure=Hydrogel; Hydogel (consists of fibers); Trigger=pH: 5; solvent: Water; concentration: 2 %wt
Transmission Electron Microscopy (TEM)
Selfassembly
Record 30 Selfassembly

Source

21085503
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanofiber Entangled tiny fibers
temperature: Room temperature solvent: Ethanol
Selfassembly; Nanostructure=Nanofiber; Entangled tiny fibers; Trigger=temperature: Room temperature; solvent: Ethanol
Transmission Electron Microscopy (TEM)
Selfassembly
Record 31 Selfassembly

Source

22534735
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanosphere Spherical structure
pH: 6.5 temperature: 37 °C solvent: Water concentration: 2mg/ml
Selfassembly; Nanostructure=Nanosphere; Spherical structure; Trigger=pH: 6.5; temperature: 37 °C; solvent: Water; concentration: 2mg/ml
Transmission Electron Microscopy (TEM) and AFM (Atomic Force Microscopy)
Selfassembly
Record 32 Selfassembly

Source

22534735
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanofiber Fibrillar structure
pH: 6.5 temperature: 37 °C solvent: Water concentration: 2mg/ml
Selfassembly; Nanostructure=Nanofiber; Fibrillar structure; Trigger=pH: 6.5; temperature: 37 °C; solvent: Water; concentration: 2mg/ml
Transmission Electron Microscopy (TEM) and AFM (Atomic Force Microscopy)
Selfassembly
Record 33 Selfassembly

Source

22535547
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube Tubular structure
temperature: 37 °C solvent: Water concentration: 1mM
Selfassembly; Nanostructure=Nanotube; Tubular structure; Trigger=temperature: 37 °C; solvent: Water; concentration: 1mM
Scanning Electron Microscopy (SEM) and AFM (Atomic force Microscopy)
Selfassembly
Record 34 Selfassembly

Source

22535547
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanosphere Spherical structure
temperature: 37 °C solvent: Water concentration: 1mM
Selfassembly; Nanostructure=Nanosphere; Spherical structure; Trigger=temperature: 37 °C; solvent: Water; concentration: 1mM
Scanning Electron Microscopy (SEM) and AFM (Atomic force Microscopy)
Selfassembly
Record 35 Selfassembly

Source

18837544
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube Hollow fibers
solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + water concentration: 2mg/ml
Selfassembly; Nanostructure=Nanotube; Hollow fibers; Trigger=solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + water; concentration: 2mg/ml
EFM (Electrostatic Force Microscopy)
Selfassembly
Record 36 Selfassembly

Source

23795243
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube, Nanovesicle Tubes and Vesicles
temperature: 30 °C solvent: Water concentration: 0.4M
Selfassembly; Nanostructure=Nanotube, Nanovesicle; Tubes and Vesicles; Trigger=temperature: 30 °C; solvent: Water; concentration: 0.4M
Insilico method: MARTINI coarse - grained molecular dynamic
Selfassembly
Record 37 Selfassembly

Source

24895323
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube Nanotubes
temperature: Room temperature solvent: HFP (1,1,1,3,3,3-hexafluoro-2-propanol) concentration: 2mg/ml
Selfassembly; Nanostructure=Nanotube; Nanotubes; Trigger=temperature: Room temperature; solvent: HFP (1,1,1,3,3,3-hexafluoro-2-propanol); concentration: 2mg/ml
ESEM (Environmental Scanning Electron Microscope)
Selfassembly
Record 38 Selfassembly

Source

24895323
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanofiber, Nanowire Needle like wire -Nanofibril structure
temperature: 180 °C solvent: HFP (1,1,1,3,3,3-hexafluoro-2-propanol) concentration: 2mg/ml
Selfassembly; Nanostructure=Nanofiber, Nanowire; Needle like wire -Nanofibril structure; Trigger=temperature: 180 °C; solvent: HFP (1,1,1,3,3,3-hexafluoro-2-propanol); concentration: 2mg/ml
ESEM (Environmental Scanning Electron Microscope)
Selfassembly
Record 39 Selfassembly

Source

29164193
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube microtube
temperature: 20°C solvent: 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP) concentration: 100 mg/ml
Selfassembly; Nanostructure=Nanotube; microtube; Trigger=temperature: 20°C; solvent: 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP); concentration: 100 mg/ml
confocal micro-Raman spectrometer
Selfassembly
Record 40 Selfassembly

Source

29289731
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube micro/nano
temperature: 50 °C solvent: 1,1,1,3,3,3-hexafluoro-2-isopropanol concentration: HFP/water
Selfassembly; Nanostructure=Nanotube; micro/nano; Trigger=temperature: 50 °C; solvent: 1,1,1,3,3,3-hexafluoro-2-isopropanol; concentration: HFP/water
Scanning Electron Microscopy (SEM)
Selfassembly
Record 41 Selfassembly

Source

29337528
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanostructure nanofibers
temperature: Room temperature solvent: HFP (1,1,1,3,3,3-hexafluor-2-propanol) and water
Selfassembly; Nanostructure=Nanostructure; nanofibers; Trigger=temperature: Room temperature; solvent: HFP (1,1,1,3,3,3-hexafluor-2-propanol) and water
SEM and TEM
Selfassembly
Record 42 Selfassembly

Source

29565077
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube
concentration: PCL:CHIT (V/V 7:3)
Selfassembly; Nanostructure=Nanotube; Trigger=concentration: PCL:CHIT (V/V; 7:3)
Selfassembly
Record 43 Selfassembly

Source

29645307
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Hydrogel
temperature: 85°C solvent: PBS
Selfassembly; Nanostructure=Hydrogel; Trigger=temperature: 85°C; solvent: PBS
Circular dichroism (CD) spectroscopy
Selfassembly
Record 44 Selfassembly

Source

30270398
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanostructure nanostructures
solvent: acetic acid concentration: 150 mg/mL
Selfassembly; Nanostructure=Nanostructure; nanostructures; Trigger=solvent: acetic acid; concentration: 150 mg/mL
Microfluidic
Selfassembly
Record 45 Selfassembly

Source

30511861
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanostructure nanostructures
Selfassembly; Nanostructure=Nanostructure; nanostructures
Selfassembly
Record 46 Selfassembly

Source

30981093
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube
pH: 4.012, 6.863 and 9.184 temperature: Room temperature solvent: 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP)
Selfassembly; Nanostructure=Nanotube; Trigger=pH: 4.012, 6.863 and 9.184; temperature: Room temperature; solvent: 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP)
Optical microscopy and scanning electron microscopy (SEM)
Selfassembly
Record 47 Selfassembly

Source

30758022
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube nanoassemblies
Selfassembly; Nanostructure=Nanotube; nanoassemblies
Transmission electron microscopy (TEM), PLM
Selfassembly
Record 48 Selfassembly

Source

27722335
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube, Nanofiber Nanotubes (NTs), Nanowires (NWs), and fibers
solvent: toluene/water-GA emulsions concentration: 1 mL
Selfassembly; Nanostructure=Nanotube, Nanofiber; Nanotubes (NTs), Nanowires (NWs), and fibers; Trigger=solvent: toluene/water-GA emulsions; concentration: 1 mL
SEM, TEM and Fourier transform infrared (FTIR)
Selfassembly
Record 49 Selfassembly

Source

27775117
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube Nanotubes
solvent: Water
Selfassembly; Nanostructure=Nanotube; Nanotubes; Trigger=solvent: Water
Raman spectroscopy and a mass-in-mass 1D model
Selfassembly
Record 50 Selfassembly

Source

28140492
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Organogel
temperature: 77 K solvent: HFIP+ toluene
Selfassembly; Nanostructure=Organogel; Trigger=temperature: 77 K; solvent: HFIP+ toluene
FTIR, SEM
Selfassembly
Record 51 Selfassembly

Source

28721731
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Hydrogel Hydrogels
pH: 7.5 temperature: Room temperature solvent: Na2B4O7-EDTA concentration: 4 mg/mL
Selfassembly; Nanostructure=Hydrogel; Hydrogels; Trigger=pH: 7.5; temperature: Room temperature; solvent: Na2B4O7-EDTA; concentration: 4 mg/mL
SEM,TEM
Selfassembly
Record 52 Selfassembly

Source

28955776
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanotube Nanotubes
pH: 7.4 solvent: Tris-NaCl EDTA (TNE) buffer
Selfassembly; Nanostructure=Nanotube; Nanotubes; Trigger=pH: 7.4; solvent: Tris-NaCl EDTA (TNE) buffer
ultra- violet (UV) absorption spectroscopy, fluorescence spectroscopy, cir- cular dichroism (CD) study, viscosity measurement and thermal dena- turation analysis of DNA
Selfassembly
Record 53 Selfassembly

Source

28994295
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanofiber amyloid-like fibrils
solvent: methanol
Selfassembly; Nanostructure=Nanofiber; amyloid-like fibrils; Trigger=solvent: methanol
UV spectrophotometry
Selfassembly
Record 54 Selfassembly

Source

24482003
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Microsphere
pH: 1.9 temperature: Room temperature solvent: Water+Sulfonated porphyrin concentration: 6.4mM
Selfassembly; Nanostructure=Microsphere; Trigger=pH: 1.9; temperature: Room temperature; solvent: Water+Sulfonated porphyrin; concentration: 6.4mM
Scanning Electron Microscopy (SEM), AFM (Atomic Force Microscopy) and Transmission Electron Microscopy (TEM)
Selfassembly
Record 55 Selfassembly

Source

25198430
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Microsphere with microtube
temperature: ~64.7 °C solvent: Methanol + HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) concentration: 1mg/ml
Selfassembly; Nanostructure=Microsphere with microtube; Trigger=temperature: ~64.7 °C; solvent: Methanol + HFIP (1,1,1,3,3,3-hexafluoro-2-propanol); concentration: 1mg/ml
Scanning Electron Microscopy (SEM)
Selfassembly
Record 56 Selfassembly

Source

23706149
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Star like morpholgy
temperature: Room temperature solvent: Etahnol concentration: 2mg/ml
Selfassembly; Nanostructure=Star like morpholgy; Trigger=temperature: Room temperature; solvent: Etahnol; concentration: 2mg/ml
Scanning Electron Microscopy (SEM)
Selfassembly
Record 57 Selfassembly

Source

24422499
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Lamellar
temperature: Room temperature solvent: Isopropanol concentration: 2.6 x 10 -4 M
Selfassembly; Nanostructure=Lamellar; Trigger=temperature: Room temperature; solvent: Isopropanol; concentration: 2.6 x 10 -4 M
Scanning Electron Microscopy (SEM)
Selfassembly
Record 58 Selfassembly

Source

20958029
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
PQD (Peptide quantum dots)
solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + Methanol concentration: 2 - 10mg/ml
Selfassembly; Nanostructure=PQD (Peptide quantum dots); Trigger=solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + Methanol; concentration: 2 - 10mg/ml
Scanning Electron Microscopy (SEM) and AFM (Atomic force Microscopy)
Selfassembly
Record 59 Selfassembly

Source

21879773
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Flower like morphology
solvent: Ethanol concentration: 4mg/ml
Selfassembly; Nanostructure=Flower like morphology; Trigger=solvent: Ethanol; concentration: 4mg/ml
Scanning Electron Microscopy (SEM)
Selfassembly
Record 60 Selfassembly

Source

21879773
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Flakelike peptidic Nanostructures
solvent: Ethanol concentration: 2 - 4mg/ml
Selfassembly; Nanostructure=Flakelike peptidic Nanostructures; Trigger=solvent: Ethanol; concentration: 2 - 4mg/ml
Scanning Electron Microscopy (SEM)
Selfassembly
Record 61 Selfassembly

Source

21879773
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Transparent thin films
solvent: Ethanol concentration: 2 - 4mg/ml
Selfassembly; Nanostructure=Transparent thin films; Trigger=solvent: Ethanol; concentration: 2 - 4mg/ml
Scanning Electron Microscopy (SEM)
Selfassembly
Record 62 Selfassembly

Source

22535547
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Spherical aggregate
temperature: 37 °C solvent: 50 % aqeous methanol concentration: 1mM
Selfassembly; Nanostructure=Spherical aggregate; Trigger=temperature: 37 °C; solvent: 50 % aqeous methanol; concentration: 1mM
Scanning Electron Microscopy (SEM) and AFM (Atomic force Microscopy)
Selfassembly
Record 63 Selfassembly

Source

27841381
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Nanoparticles
pH: 8 temperature: Room temperature solvent: 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP)/sodium phosphate buffer concentration: 16 mM
Selfassembly; Nanostructure=Nanoparticles; Trigger=pH: 8; temperature: Room temperature; solvent: 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP)/sodium phosphate buffer; concentration: 16 mM
TEM and SEM
Selfassembly
Record 64 Selfassembly

Source

28657720
10.1016/j.compbiomed.2021.104391
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly

Self-Assembly

Nanostructure formation
Liposomes
temperature: Room temperature solvent: 1,1,3,3,6,6-hexafluoro-2-propanol (HFP) concentration: 1 mg/mL
Selfassembly; Nanostructure=Liposomes; Trigger=temperature: Room temperature; solvent: 1,1,3,3,6,6-hexafluoro-2-propanol (HFP); concentration: 1 mg/mL
Scanning Electron Microscopy (SEM)
Selfassembly
Evidence Records 67 records
Evidence 1 Activity

Activity

IC50
ACE inhibitors
59.15 µM
Inhibitor of Angiotensin-Converting Enzyme (ACE) (EC 3.4.15.1) (MEROPS ID: M02-001)
ACE inhibitor
ah

Source & Reference

NA
Neves A. C., Harnedy P. A., O’Keeffe M. B., FitzGerald R. J.
Bioactive peptides from Atlantic salmon (Salmo salar) with angiotensin converting enzyme and dipeptidyl peptidase IV inhibitory, and antioxidant activities. Food Chem., 218, 396-405, 2017
2017
Journal

Other

2
BIOPEP-UWM database of bioactive peptides SMILES: c1ccc(cc1)C[C@@H](C(=O)N[C@@H](Cc1ccccc1)C(=O)O)N InChI=1S/C18H20N2O3/c19-15(11-13-7-3-1-4-8-13)17(21)20-16(18(22)23)12-14-9-5-2-6-10-14/h1-10,15-16H,11-12,19H2,(H,20,21)(H,22,23)/t15-,16-/m0/s1 InChIKey: GKZIWHRNKRBEOH-HOTGVXAUSA-N Information concerning Angiotensin-Converting Enzyme (ACE) is available in MEROPS database of proteolytic enzymes (http://merops.sanger.ac.uk/) ID: M02-001 Inhibitor of Pseudolysin (EC 3.4.24.26) (MEROPS ID: M04.005) according to BRENDA database Inhibitor of Peptide transporting ATP-ase (EC 3.6.3.43) according to BRENDA database Antimicrobial peptide according to the ParaPep database Inhibitor od Dipeptidyl Peptidase IV (EC 3.4.14.5) (MEROPS ID: S09.003) according to the BIOPEP-UWM database of bioactive peptides (ID 10028) Bitter peptide according to the BIOPEP-UWM database of sensory peptides and amino acids (ID 9)
Evidence 2 Activity

Activity

IC50
Antihypertensive
59.15 µM
Inhibitor of Angiotensin-Converting Enzyme (ACE) (EC 3.4.15.1) (MEROPS ID: M02-001)
ACE inhibitor
ah

Source & Reference

AHTPDB
Neves A. C., Harnedy P. A., O’Keeffe M. B., FitzGerald R. J.
Bioactive peptides from Atlantic salmon (Salmo salar) with angiotensin converting enzyme and dipeptidyl peptidase IV inhibitory, and antioxidant activities. Food Chem., 218, 396-405, 2017
2017
Journal

Other

Source Activity Label Source Definition
Antihypertensive
AHTPDB manually curated experimentally validated antihypertensive peptide annotation.
2
BIOPEP-UWM database of bioactive peptides SMILES: c1ccc(cc1)C[C@@H](C(=O)N[C@@H](Cc1ccccc1)C(=O)O)N InChI=1S/C18H20N2O3/c19-15(11-13-7-3-1-4-8-13)17(21)20-16(18(22)23)12-14-9-5-2-6-10-14/h1-10,15-16H,11-12,19H2,(H,20,21)(H,22,23)/t15-,16-/m0/s1 InChIKey: GKZIWHRNKRBEOH-HOTGVXAUSA-N Information concerning Angiotensin-Converting Enzyme (ACE) is available in MEROPS database of proteolytic enzymes (http://merops.sanger.ac.uk/) ID: M02-001 Inhibitor of Pseudolysin (EC 3.4.24.26) (MEROPS ID: M04.005) according to BRENDA database Inhibitor of Peptide transporting ATP-ase (EC 3.6.3.43) according to BRENDA database Antimicrobial peptide according to the ParaPep database Inhibitor od Dipeptidyl Peptidase IV (EC 3.4.14.5) (MEROPS ID: S09.003) according to the BIOPEP-UWM database of bioactive peptides (ID 10028) Bitter peptide according to the BIOPEP-UWM database of sensory peptides and amino acids (ID 9)
Evidence 3 Activity

Activity

IC50
iDPPIV
730.00 µM
Inhibitor od Dipeptidyl Peptidase IV (EC 3.4.14.5) (MEROPS ID: S09.003)
dipeptidyl peptidase IV inhibitor
dpp

Source & Reference

iDPPIV
Neves A. C., Harnedy P. A., O’Keeffe M. B., FitzGerald R. J.
Bioactive peptides from Atlantic salmon (Salmo salar) with angiotensin converting enzyme and dipeptidyl peptidase IV inhibitory, and antioxidant activities. Food Chem., 218, 396-405, 2017
2017
Journal

Other

2
BIOPEP-UWM database of bioactive pepetides SMILES: c1ccc(cc1)C[C@@H](C(=O)N[C@@H](Cc1ccccc1)C(=O)O)N InChI=1S/C18H20N2O3/c19-15(11-13-7-3-1-4-8-13)17(21)20-16(18(22)23)12-14-9-5-2-6-10-14/h1-10,15-16H,11-12,19H2,(H,20,21)(H,22,23)/t15-,16-/m0/s1 InChIKey: GKZIWHRNKRBEOH-HOTGVXAUSA-N Information concerning Angiotensin-Converting Enzyme (ACE) is available in MEROPS database of proteolytic enzymes (http://merops.sanger.ac.uk/) ID: M02-001 Inhibitor of angiotensin-converting enzyme (EC 3.4.15.1) (MEROPS ID: M02-001) according to the AHTPDB database the BIOPEP-UWM database of bioactive peptides (ID 10027) the EROP-Moscow database Inhibitor of Pseudolysin (EC 3.4.24.26) (MEROPS ID: M04.005) according to BRENDA database Inhibitor of Peptide transporting ATP-ase (EC 3.6.3.43) according to BRENDA database Antimicrobial peptide according to the ParaPep database Bitter peptide according to the BIOPEP-UWM database of sensory peptides and amino acids (ID 9)
Evidence 4 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Trigger=temperature: 80 °C solvent: Aqueous dispersion concentration: >=100 mg/ml stock soln
Nanotube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: 80 °C solvent: Aqueous dispersion concentration: >=100 mg/ml stock soln
Transmission Electron Microscopy (TEM)
12714741
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 5 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Trigger=temperature: Stable upto 90 °C solvent: Aqueous dispersion concentration: 2 mg/ml
Nanotube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Stable upto 90 °C solvent: Aqueous dispersion concentration: 2 mg/ml
Scanning Electron Microscopy (SEM), Transmission Electron Microscopy (TEM), CD (Circular Dichroism spectroscopy)
16430299
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 6 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Trigger=temperature: Stable upto 100 °C solvent: Aqueous dispersion concentration: 1mg/ml
Nanotube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Stable upto 100 °C solvent: Aqueous dispersion concentration: 1mg/ml
AFM (Atomic Force Microscopy)
16719470
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 7 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Trigger=pH: 7.2 temperature: Room temperature solvent: Aqueous dispersion concentration: 10 mg/ml
Nanotube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
pH: 7.2 temperature: Room temperature solvent: Aqueous dispersion concentration: 10 mg/ml
CD (Circular Dichroism spectroscopy)
17328086
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 8 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Trigger=solvent: Aqueous dispersion concentration: 10 mg/ml
Nanotube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
solvent: Aqueous dispersion concentration: 10 mg/ml
Scanning Electron Microscopy (SEM)
18035858
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 9 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanofiber Trigger=pH: 7 temperature: (-)20 °C solvent: Water concentration: 2mM
Nanofiber

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
pH: 7 temperature: (-)20 °C solvent: Water concentration: 2mM
FE - SEM (Field Emission Scanning Electron Microscopy or FE - SEM)
25621167
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 10 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanovesicle, Nanotube Spherical vesicle ( in 7/10 MD runs) Nanotube (in 2/10 MD runs) Bialyer shape (in 1/10 MD runs) Trigger=temperature: 37 °C solvent: Water concentration: 85 mg/ml
Nanovesicle, Nanotube Spherical vesicle ( in 7/10 MD runs) Nanotube (in 2/10 MD runs) Bialyer shape (in 1/10 MD runs)

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: 37 °C solvent: Water concentration: 85 mg/ml
Insilico tools i.e, Coarse - grained molecular dynamics (MD) simulations and GROMACS software
22468743
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 11 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanovesicle, Nanotube vesicle (in 3/10 MD runs) Nanotube ( in 3/10 MD runs) Flat bialyer with holes shape (in 4/10 MD runs) Trigger=temperature: 37 °C solvent: Water concentration: 120 mg/ml
Nanovesicle, Nanotube vesicle (in 3/10 MD runs) Nanotube ( in 3/10 MD runs) Flat bialyer with holes shape (in 4/10 MD runs)

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: 37 °C solvent: Water concentration: 120 mg/ml
Insilico tools i.e, Coarse - grained molecular dynamics (MD) simulations and GROMACS software
22468743
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 12 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Trigger=pH: 6 temperature: Room temperature solvent: 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP)/water concentration: 2mg/ml
Nanotube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
pH: 6 temperature: Room temperature solvent: 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP)/water concentration: 2mg/ml
AFM (Atomic Force Microscopy
19496552
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 13 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Tubular Nanostructure Trigger=temperature: Room temperature solvent: Water concentration: 2mg/ml
Nanotube Tubular Nanostructure

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Room temperature solvent: Water concentration: 2mg/ml
Scanning Electron Microscopy (SEM), AFM (Atomic Force Microscopy)
20000323
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 14 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanovesicle Trigger=temperature: 80 °C solvent: Acetone concentration: 2mg/ml
Nanovesicle

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: 80 °C solvent: Acetone concentration: 2mg/ml
Scanning Electron Microscopy (SEM), AFM (Atomic Force Microscopy)
20000323
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 15 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanoparticle Randomly ordered , dense tubular Nanostructures Trigger=temperature: Room temperature solvent: Etahnol concentration: 2mg/ml
Nanoparticle Randomly ordered , dense tubular Nanostructures

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Room temperature solvent: Etahnol concentration: 2mg/ml
Scanning Electron Microscopy (SEM)
23706149
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 16 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Organogel Organogel (Thick fibers) Trigger=temperature: Room temperature solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol)+Chloroform concentration: 8mM
Organogel Organogel (Thick fibers)

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Room temperature solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol)+Chloroform concentration: 8mM
Scanning Electron Microscopy (SEM)
23706149
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 17 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Organogel Organogel (Small fibres with varying length)) Trigger=temperature: Room temperature solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol)+Chloroform concentration: 8mM
Organogel Organogel (Small fibres with varying length))

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Room temperature solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol)+Chloroform concentration: 8mM
Scanning Electron Microscopy (SEM)
23706149
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 18 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Hydrogel Trigger=pH: 4.8 temperature: Room temperature solvent: Water concentration: 2% wt
Hydrogel

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
pH: 4.8 temperature: Room temperature solvent: Water concentration: 2% wt
Transmission Electron Microscopy (TEM)
25229206
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 19 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Hydrogel Semitranslucent Hydrogel Trigger=pH: 7.4 temperature: Room temperature solvent: Water concentration: 2% wt
Hydrogel Semitranslucent Hydrogel

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
pH: 7.4 temperature: Room temperature solvent: Water concentration: 2% wt
Transmission Electron Microscopy (TEM)
25229206
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 20 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Trigger=temperature: Room temperature solvent: HFP (1,1,1,3,3,3-hexafluoro-2-propanol) + water concentration: 2mg/ml
Nanotube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Room temperature solvent: HFP (1,1,1,3,3,3-hexafluoro-2-propanol) + water concentration: 2mg/ml
Transmission Electron Microscopy (TEM), Scanning Electron Microscopy (SEM) and AFM (Atomic Force Microscopy)
24301009
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 21 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Hydrogel Translucent gel Trigger=temperature: Room temperature solvent: Formamide solution concentration: 2.6 x 10 -4 M
Hydrogel Translucent gel

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Room temperature solvent: Formamide solution concentration: 2.6 x 10 -4 M
Scanning Electron Microscopy (SEM)
24422499
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 22 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Vertical Nanotube Trigger=temperature: 220 °C concentration: 1mg lyophilized powder
Nanotube Vertical Nanotube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: 220 °C concentration: 1mg lyophilized powder
Scanning Electron Microscopy (SEM)
19893524
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 23 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Trigger=temperature: Room temperature solvent: Water concentration: 4mg/ml
Nanotube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Room temperature solvent: Water concentration: 4mg/ml
FE - SEM (Field Emission Scanning Electron Microscopy)
19198495
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 24 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanoribbon Trigger=temperature: Room temperature solvent: Methanol concentration: 10mg/ml
Nanoribbon

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Room temperature solvent: Methanol concentration: 10mg/ml
FE - SEM (Field Emission Scanning Electron Microscopy)
19198495
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 25 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanoribbon, Nanowire Nanoribbon and Nanowires Trigger=temperature: Room temperature solvent: Dichloromethane concentration: 4mg/ml
Nanoribbon, Nanowire Nanoribbon and Nanowires

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Room temperature solvent: Dichloromethane concentration: 4mg/ml
FE - SEM (Field Emission Scanning Electron Microscopy)
19198495
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 26 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanofiber Fibril Trigger=temperature: 50 °C for sonication solvent: Water + toluene concentration: 5mg/ml
Nanofiber Fibril

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: 50 °C for sonication solvent: Water + toluene concentration: 5mg/ml
FE - SEM (Field Emission Scanning Electron Microscopy)
20356006
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 27 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Trigger=solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + water concentration: 2-5 mg/ml
Nanotube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + water concentration: 2-5 mg/ml
Scanning Electron Microscopy (SEM) and AFM (Atomic force Microscopy)
20958029
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 28 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Trigger=pH: 5-6 solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + water concentration: 2mg/ml
Nanotube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
pH: 5-6 solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + water concentration: 2mg/ml
Scanning Electron Microscopy (SEM)
21132174
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 29 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Trigger=temperature: Room temperature solvent: HFP (1,1,1,3,3,3-hexafluoro-2-propanol) + water concentration: 1 mg/ml
Nanotube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Room temperature solvent: HFP (1,1,1,3,3,3-hexafluoro-2-propanol) + water concentration: 1 mg/ml
Transmission Electron Microscopy (TEM) and DLS (Dynamic Light scattering)
21221462
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 30 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Tubular structure Trigger=solvent: Ethanol concentration: 2 mg/ml
Nanotube Tubular structure

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
solvent: Ethanol concentration: 2 mg/ml
Scanning Electron Microscopy (SEM)
21879773
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 31 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube, Nanoribbon Tubular and ribbon like morphology Trigger=solvent: Ethanol concentration: 2 mg/ml
Nanotube, Nanoribbon Tubular and ribbon like morphology

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
solvent: Ethanol concentration: 2 mg/ml
Scanning Electron Microscopy (SEM)
21879773
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 32 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Hydrogel Hydogel (consists of fibers) Trigger=pH: 5 solvent: Water concentration: 2 %wt
Hydrogel Hydogel (consists of fibers)

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
pH: 5 solvent: Water concentration: 2 %wt
Transmission Electron Microscopy (TEM)
21948432
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 33 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanofiber Entangled tiny fibers Trigger=temperature: Room temperature solvent: Ethanol
Nanofiber Entangled tiny fibers

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Room temperature solvent: Ethanol
Transmission Electron Microscopy (TEM)
21085503
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 34 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanosphere Spherical structure Trigger=pH: 6.5 temperature: 37 °C solvent: Water concentration: 2mg/ml
Nanosphere Spherical structure

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
pH: 6.5 temperature: 37 °C solvent: Water concentration: 2mg/ml
Transmission Electron Microscopy (TEM) and AFM (Atomic Force Microscopy)
22534735
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 35 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanofiber Fibrillar structure Trigger=pH: 6.5 temperature: 37 °C solvent: Water concentration: 2mg/ml
Nanofiber Fibrillar structure

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
pH: 6.5 temperature: 37 °C solvent: Water concentration: 2mg/ml
Transmission Electron Microscopy (TEM) and AFM (Atomic Force Microscopy)
22534735
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 36 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Tubular structure Trigger=temperature: 37 °C solvent: Water concentration: 1mM
Nanotube Tubular structure

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: 37 °C solvent: Water concentration: 1mM
Scanning Electron Microscopy (SEM) and AFM (Atomic force Microscopy)
22535547
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 37 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanosphere Spherical structure Trigger=temperature: 37 °C solvent: Water concentration: 1mM
Nanosphere Spherical structure

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: 37 °C solvent: Water concentration: 1mM
Scanning Electron Microscopy (SEM) and AFM (Atomic force Microscopy)
22535547
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 38 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Hollow fibers Trigger=solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + water concentration: 2mg/ml
Nanotube Hollow fibers

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + water concentration: 2mg/ml
EFM (Electrostatic Force Microscopy)
18837544
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 39 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube, Nanovesicle Tubes and Vesicles Trigger=temperature: 30 °C solvent: Water concentration: 0.4M
Nanotube, Nanovesicle Tubes and Vesicles

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: 30 °C solvent: Water concentration: 0.4M
Insilico method: MARTINI coarse - grained molecular dynamic
23795243
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 40 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Nanotubes Trigger=temperature: Room temperature solvent: HFP (1,1,1,3,3,3-hexafluoro-2-propanol) concentration: 2mg/ml
Nanotube Nanotubes

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Room temperature solvent: HFP (1,1,1,3,3,3-hexafluoro-2-propanol) concentration: 2mg/ml
ESEM (Environmental Scanning Electron Microscope)
24895323
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 41 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanofiber, Nanowire Needle like wire -Nanofibril structure Trigger=temperature: 180 °C solvent: HFP (1,1,1,3,3,3-hexafluoro-2-propanol) concentration: 2mg/ml
Nanofiber, Nanowire Needle like wire -Nanofibril structure

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: 180 °C solvent: HFP (1,1,1,3,3,3-hexafluoro-2-propanol) concentration: 2mg/ml
ESEM (Environmental Scanning Electron Microscope)
24895323
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 42 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube microtube Trigger=temperature: 20°C solvent: 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP) concentration: 100 mg/ml
Nanotube microtube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: 20°C solvent: 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP) concentration: 100 mg/ml
confocal micro-Raman spectrometer
29164193
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 43 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube micro/nano Trigger=temperature: 50 °C solvent: 1,1,1,3,3,3-hexafluoro-2-isopropanol concentration: HFP/water
Nanotube micro/nano

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: 50 °C solvent: 1,1,1,3,3,3-hexafluoro-2-isopropanol concentration: HFP/water
Scanning Electron Microscopy (SEM)
29289731
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 44 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanostructure nanofibers Trigger=temperature: Room temperature solvent: HFP (1,1,1,3,3,3-hexafluor-2-propanol) and water
Nanostructure nanofibers

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Room temperature solvent: HFP (1,1,1,3,3,3-hexafluor-2-propanol) and water
SEM and TEM
29337528
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 45 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Trigger=concentration: PCL:CHIT (V/V 7:3)
Nanotube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
concentration: PCL:CHIT (V/V 7:3)
29565077
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 46 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Hydrogel Trigger=temperature: 85°C solvent: PBS
Hydrogel

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: 85°C solvent: PBS
Circular dichroism (CD) spectroscopy
29645307
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 47 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanostructure nanostructures Trigger=solvent: acetic acid concentration: 150 mg/mL
Nanostructure nanostructures

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
solvent: acetic acid concentration: 150 mg/mL
Microfluidic
30270398
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 48 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanostructure nanostructures
Nanostructure nanostructures

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
30511861
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 49 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Trigger=pH: 4.012, 6.863 and 9.184 temperature: Room temperature solvent: 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP)
Nanotube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
pH: 4.012, 6.863 and 9.184 temperature: Room temperature solvent: 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP)
Optical microscopy and scanning electron microscopy (SEM)
30981093
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 50 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube nanoassemblies
Nanotube nanoassemblies

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
Transmission electron microscopy (TEM), PLM
30758022
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 51 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube, Nanofiber Nanotubes (NTs), Nanowires (NWs), and fibers Trigger=solvent: toluene/water-GA emulsions concentration: 1 mL
Nanotube, Nanofiber Nanotubes (NTs), Nanowires (NWs), and fibers

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
solvent: toluene/water-GA emulsions concentration: 1 mL
SEM, TEM and Fourier transform infrared (FTIR)
27722335
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 52 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Nanotubes Trigger=solvent: Water
Nanotube Nanotubes

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
solvent: Water
Raman spectroscopy and a mass-in-mass 1D model
27775117
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 53 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Organogel Trigger=temperature: 77 K solvent: HFIP+ toluene
Organogel

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: 77 K solvent: HFIP+ toluene
FTIR, SEM
28140492
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 54 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Hydrogel Hydrogels Trigger=pH: 7.5 temperature: Room temperature solvent: Na2B4O7-EDTA concentration: 4 mg/mL
Hydrogel Hydrogels

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
pH: 7.5 temperature: Room temperature solvent: Na2B4O7-EDTA concentration: 4 mg/mL
SEM,TEM
28721731
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 55 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanotube Nanotubes Trigger=pH: 7.4 solvent: Tris-NaCl EDTA (TNE) buffer
Nanotube Nanotubes

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
pH: 7.4 solvent: Tris-NaCl EDTA (TNE) buffer
ultra- violet (UV) absorption spectroscopy, fluorescence spectroscopy, cir- cular dichroism (CD) study, viscosity measurement and thermal dena- turation analysis of DNA
28955776
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 56 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanofiber amyloid-like fibrils Trigger=solvent: methanol
Nanofiber amyloid-like fibrils

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
solvent: methanol
UV spectrophotometry
28994295
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database.
Evidence 57 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Microsphere Trigger=pH: 1.9 temperature: Room temperature solvent: Water+Sulfonated porphyrin concentration: 6.4mM
Microsphere

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
pH: 1.9 temperature: Room temperature solvent: Water+Sulfonated porphyrin concentration: 6.4mM
Scanning Electron Microscopy (SEM), AFM (Atomic Force Microscopy) and Transmission Electron Microscopy (TEM)
24482003
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1216 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Evidence 58 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Microsphere with microtube Trigger=temperature: ~64.7 °C solvent: Methanol + HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) concentration: 1mg/ml
Microsphere with microtube

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: ~64.7 °C solvent: Methanol + HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) concentration: 1mg/ml
Scanning Electron Microscopy (SEM)
25198430
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1233 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Evidence 59 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Star like morpholgy Trigger=temperature: Room temperature solvent: Etahnol concentration: 2mg/ml
Star like morpholgy

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Room temperature solvent: Etahnol concentration: 2mg/ml
Scanning Electron Microscopy (SEM)
23706149
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1331 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Evidence 60 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Lamellar Trigger=temperature: Room temperature solvent: Isopropanol concentration: 2.6 x 10 -4 M
Lamellar

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Room temperature solvent: Isopropanol concentration: 2.6 x 10 -4 M
Scanning Electron Microscopy (SEM)
24422499
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1454 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Evidence 61 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=PQD (Peptide quantum dots) Trigger=solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + Methanol concentration: 2 - 10mg/ml
PQD (Peptide quantum dots)

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + Methanol concentration: 2 - 10mg/ml
Scanning Electron Microscopy (SEM) and AFM (Atomic force Microscopy)
20958029
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1535 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Evidence 62 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Flower like morphology Trigger=solvent: Ethanol concentration: 4mg/ml
Flower like morphology

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
solvent: Ethanol concentration: 4mg/ml
Scanning Electron Microscopy (SEM)
21879773
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1560 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Evidence 63 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Flakelike peptidic Nanostructures Trigger=solvent: Ethanol concentration: 2 - 4mg/ml
Flakelike peptidic Nanostructures

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
solvent: Ethanol concentration: 2 - 4mg/ml
Scanning Electron Microscopy (SEM)
21879773
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1563 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Evidence 64 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Transparent thin films Trigger=solvent: Ethanol concentration: 2 - 4mg/ml
Transparent thin films

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
solvent: Ethanol concentration: 2 - 4mg/ml
Scanning Electron Microscopy (SEM)
21879773
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1564 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Evidence 65 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Spherical aggregate Trigger=temperature: 37 °C solvent: 50 % aqeous methanol concentration: 1mM
Spherical aggregate

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: 37 °C solvent: 50 % aqeous methanol concentration: 1mM
Scanning Electron Microscopy (SEM) and AFM (Atomic force Microscopy)
22535547
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1616 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Evidence 66 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Nanoparticles Trigger=pH: 8 temperature: Room temperature solvent: 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP)/sodium phosphate buffer concentration: 16 mM
Nanoparticles

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
pH: 8 temperature: Room temperature solvent: 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP)/sodium phosphate buffer concentration: 16 mM
TEM and SEM
27841381
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1886 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Evidence 67 Selfassembly

Activity

Nanostructure formation
Selfassembly Nanostructure=Liposomes Trigger=temperature: Room temperature solvent: 1,1,3,3,6,6-hexafluoro-2-propanol (HFP) concentration: 1 mg/mL
Liposomes

Source & Reference

SAPdb
10.1016/j.compbiomed.2021.104391

Other

None specified
temperature: Room temperature solvent: 1,1,3,3,6,6-hexafluoro-2-propanol (HFP) concentration: 1 mg/mL
Scanning Electron Microscopy (SEM)
28657720
SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly
SAPdb ID 1953 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row.
Additional Detail Fields 6 fields
temperature: 80 °C solvent: Aqueous dispersion concentration: >=100 mg/ml stock soln temperature: Stable upto 90 °C concentration: 2 mg/ml temperature: Stable upto 100 °C concentration: 1mg/ml pH: 7.2 temperature: Room temperature concentration: 10 mg/ml pH: 7 temperature: (-)20 °C solvent: Water concentration: 2mM temperature: 37 °C concentration: 85 mg/ml concentration: 120 mg/ml pH: 6 solvent: 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP)/water concentration: 2mg/ml temperature: 80 °C solvent: Acetone solvent: Etahnol solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol)+Chloroform concentration: 8mM pH: 4.8 concentration: 2% wt pH: 7.4 solvent: HFP (1,1,1,3,3,3-hexafluoro-2-propanol) + water solvent: Formamide solution concentration: 2.6 x 10 -4 M temperature: 220 °C concentration: 1mg lyophilized powder concentration: 4mg/ml solvent: Methanol concentration: 10mg/ml solvent: Dichloromethane temperature: 50 °C for sonication solvent: Water + toluene concentration: 5mg/ml solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + water concentration: 2-5 mg/ml pH: 5-6 solvent: HFP (1,1,1,3,3,3-hexafluoro-2-propanol) + water concentration: 1 mg/ml solvent: Ethanol pH: 5 concentration: 2 %wt pH: 6.5 temperature: 37 °C concentration: 1mM temperature: 30 °C concentration: 0.4M solvent: HFP (1,1,1,3,3,3-hexafluoro-2-propanol) temperature: 180 °C temperature: 20°C solvent: 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP) concentration: 100 mg/ml temperature: 50 °C solvent: 1,1,1,3,3,3-hexafluoro-2-isopropanol concentration: HFP/water solvent: HFP (1,1,1,3,3,3-hexafluor-2-propanol) and water concentration: PCL:CHIT (V/V 7:3) temperature: 85°C solvent: PBS solvent: acetic acid concentration: 150 mg/mL pH: 4.012, 6.863 and 9.184 solvent: toluene/water-GA emulsions concentration: 1 mL temperature: 77 K solvent: HFIP+ toluene pH: 7.5 solvent: Na2B4O7-EDTA concentration: 4 mg/mL solvent: Tris-NaCl EDTA (TNE) buffer pH: 1.9 solvent: Water+Sulfonated porphyrin concentration: 6.4mM temperature: ~64.7 °C solvent: Methanol + HFIP (1,1,1,3,3,3-hexafluoro-2-propanol) solvent: Isopropanol solvent: HFIP (1,1,1,3,3,3-hexafluoro-2-Isopropanol) + Methanol concentration: 2 - 10mg/ml concentration: 2 - 4mg/ml solvent: 50 % aqeous methanol pH: 8 solvent: 1,1,1,3,3,3-hexafluoro-2-propanol (HFIP)/sodium phosphate buffer concentration: 16 mM solvent: 1,1,3,3,6,6-hexafluoro-2-propanol (HFP)
None specified
SAPdb ID NA low-detail seed row from experimentally curated self-assembly database. SAPdb ID 1216 nanostr_class=Other but nanostr gives explicit morphology low-detail seed row. SAPdb ID 1233 SAPdb ID 1331 SAPdb ID 1454 SAPdb ID 1535 SAPdb ID 1560 SAPdb ID 1563 SAPdb ID 1564 SAPdb ID 1616 SAPdb ID 1886 SAPdb ID 1953
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SAPdb: A database of short peptides and the corresponding nanostructures formed by self-assembly