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Peptide record

TPDB19017

Antibacterial Antifungal standard
12 amino acids
Basic Information
3D PDB MODEL
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TPDB19017
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 12-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
FFPIVGKRLYGL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C71H108N16O14
ANDCEQHMSTW
GLF
1409.74
10.42
2
0
7
+2
-0.50
0.817
121.67
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
1490
1.06
1
Residue Composition
number
0
A
1
R
0
N
0
D
0
C
0
E
0
Q
2
G
0
H
1
I
2
L
1
K
0
M
2
F
1
P
0
S
0
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 2 H: 0 I: 1 L: 2 K: 1 M: 0 F: 2 P: 1 S: 0 T: 0 W: 0 Y: 1 V: 1
Chemical Descriptors
12 reviewed residue count
C71H108N16O14 sequence-only estimate (linear, free termini)
1409.74 sequence-only estimate (linear, free termini)
10.42 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
-0.50 sequence-only estimate (linear, free termini)
0.817 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb