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Peptide record

TPDB18947

Antibacterial Antifungal standard
35 amino acids
Basic Information
3D PDB MODEL
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TPDB18947
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 35-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
FCKGGSCHFGGCPSHLIKVGSCFGFRSCCKWPWNA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C170H244N48O41S6
DEQMTY
CG
3808.46
8.60
6
0
10
+4
0.44
0.109
33.43
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
11375
2.99
11
Residue Composition
number
1
A
1
R
1
N
0
D
6
C
0
E
0
Q
6
G
2
H
1
I
1
L
3
K
0
M
4
F
2
P
4
S
0
T
2
W
0
Y
1
V
Amino Acid Distribution
A: 1 R: 1 N: 1 D: 0 C: 6 E: 0 Q: 0 G: 6 H: 2 I: 1 L: 1 K: 3 M: 0 F: 4 P: 2 S: 4 T: 0 W: 2 Y: 0 V: 1
Chemical Descriptors
35 reviewed residue count
C170H244N48O41S6 sequence-only estimate (linear, free termini)
3808.46 sequence-only estimate (linear, free termini)
8.60 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
0.44 sequence-only estimate (linear, free termini)
0.109 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb