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Peptide record

TPDB18854

Antibacterial standard
8 amino acids
Basic Information
3D PDB MODEL
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TPDB18854
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 8-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
EPFKLSLH
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C46H71N11O12
ARNDCQGIMTWYV
L
970.14
7.82
2
1
3
+0
0.95
-0.325
97.50
Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour
0
0.00
1
Residue Composition
number
0
A
0
R
0
N
0
D
0
C
1
E
0
Q
0
G
1
H
0
I
2
L
1
K
0
M
1
F
1
P
1
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 0 E: 1 Q: 0 G: 0 H: 1 I: 0 L: 2 K: 1 M: 0 F: 1 P: 1 S: 1 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
8 reviewed residue count
C46H71N11O12 sequence-only estimate (linear, free termini)
970.14 sequence-only estimate (linear, free termini)
7.82 sequence-only estimate (linear, free termini)
+0 sequence-only estimate (linear, free termini)
0.95 sequence-only estimate (linear, free termini)
-0.325 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA